barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26814_PI390587928Hv_44K_v2TGTCCGCAAATTCACCTTGGCTCGTAGGTGTATATGAACCCATCTCTAATAGTTTGCCAT866GeneList: grey60
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 5.1334.3031.5640.6550.2200.231
Raw 158.673210.69066.97545.6903.3644.812



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_1868810423e-25867 - 92610060 / 60plus



Contig Sequence (1042 bp)

>U35_18688 1042 Hv_44K_v2
GATCATACCAGGCCTATTTGCGAATAACCTCAAGATCACCAACATTCTTATGGACCAGAA
TCAGGTCGCCAAAATCGGCAGCTACAACATCCCCATTCTGTCCGAGACCATGAAATCAGA
GGGAGGAGCTGGAAGCAAGTATCCATCGGATAGGGTTCCTAATGGTGATAAGATTGACAT
GTACGATTTTGGTGTGATACTGCTGGAGGTTGTCTCCGGCAGGCCCATTAGTTCCATATA
CGAGGTGGAGATAATGAAAGAACAGTTGCAATCGGCGCTGACAGCACAAGGCCCGAGCAA
GAGGTGGAACTTGGTGGACCCGGCGGTCAGCAAGGGCTGCTCCGACGACTCCATGAGGAC
CGTCATGGAAATCTGCCTGCGCTGCCTTGCCAAGGAGCCAACGCAGAGGCCTTCAGTCGA
AGACATGCTCTGGAACCTGCAGTTTGCAGCCCAGGTGCAGGATGACTCCCGGAGCAGCGA
GGAGTCCCCGCTCTCACCCTCGCAGCAGCTCCATGCACAATCCGCAGAGGACTGACCACT
GGGGCTAGGGCAGGCTCAGAAAAATACATTATGATTCTCCATCAAGCATCATGGCTCAAG
GGAAGGATTAGACATGGTATTCTCAGGCCAAGTGTACAGCAACAGCTCAAGCCGGACCCC
GTGATGCATGCATATACTCTACTTTGCACCAAGAGGCCACCGGATATGATGAGTTTTCAA
CCGCCCAAAGGACGACTAGTAATATGCTCGAGGAATTGTAGGATGGATTGGAATGCATTC
CCATAAAACCATCATGTCTTCCCAGTGTCTTGAAAATTACACTTTGTGTCTAGGAATAGA
ATTTTGTATGGTTTTCAACAACAGGATGTCCGCAAATTCACCTTGGCTCGTAGGTGTATA
TGAACCCATCTCTAATAGTTTGCCATCTCTAAAAAAAAAAAAAATTTTTTTAAAAAAAGT
CCCGCCATGTAAATCCGGCACATTATATATTTGTGCATCAAGTTTCGATGAAAAAAACAT
TTTCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_18688 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g07230.17982e-83protein|protein kinase, putative, expressed
Brachypodium v1_2Bradi1g56540.37983e-84
Arabidopsis v10None