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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26811_PI390587928Hv_44K_v2GAAGAATCAATAGGGAGCTGTTTTTTGTTATGCTATCTGCCAAGTGCCGAATTTTTGTTA16GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37107811523e-211026 - 10859758 / 60plus ABC10724 ABC43245
MLOCMLOC_39356.219593e-21749 - 8089758 / 60plus ABC10724 ABC43245
MLOCMLOC_39356.333433e-212010 - 20699758 / 60plus ABC10724 ABC43245
MLOCMLOC_39356.119593e-21750 - 8099758 / 60plus ABC10724 ABC43245
JLOC1JLOC1_25653.120892e-21740 - 7999758 / 60plus
Harvest21ABC432455113e-2517 - 7610060 / 60minusABC43245
Harvest35U35_449525113e-2517 - 7610060 / 60minus



Contig Sequence (511 bp)

>U35_44952 511 Hv_44K_v2
TTTTTTTTTTTTTTTTTAACAAAAATTCGGCACTTGGCAGATAGCATAACAAAAAACAGC
TCCCTATTGATTCTTCGTCGAGCAATCATCGATGTAACCTGGAGGCTCATCGAAGTGCAT
CGAATACCCGAACTTCTAAATTTCATACCTAGGTGCATCGAATACAAACCTATACAGTAT
ATCTGTGAATTACACTCCAAATGCATGTAGGTAACAGCACTGTATCAGCTAGGAGGCATC
CAGCTTCTGACTCTCTTTGGATCCTTGATCAAAAGTGACCTCCATTTCTTTCTTTCTCGT
CGAAATTCAAAGTCAATTATATTTCCAGTAGTGTCTCATGGGGCTTTCTCTCCATTCAGT
TTCACCGCAGCAGCTTCCTCCTGTATTTCAGAGGTAGTGCTAACATTACCCTCTTCTATG
GGTCCTGTTCCTTTGATGCTTCCTACTTTCACATACTTGCTGGTGAACTTGTACTCCCAG
TCCTGCAAGGCACTAAGCTCAAATGAACCAA



Homology of Contig U35_44952 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None