barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26365_PI390587928Hv_44K_v2AACTAATCCCTTTGTCATTTAACCACGTCTTTCCTGCTGTGGTGCAGTGAACGAGAACAT290GeneList: lightcyan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1400.9951.7931.4040.6580.807
Raw 13.25116.80429.09239.0524.5097.940



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_407717213e-25291 - 35010060 / 60minus



Contig Sequence (721 bp)

>U35_40771 721 Hv_44K_v2
TTTTTTTTTTTTTTTTTCTACATGGAACTGTAAATTGTCATTTTCGAAGCCGTCATATAT
GGAGTCAAAGGATTACATATGTAAAACAAAGAATCCACAAACAAGTAATGGCGCGCAGTT
CAGTGTTACAGCTTCGAGGGGACGATGAGGCGGTGTTTTGGACGTTGCATCAGACCCTAG
ATGTCCCCAGCTTGCGCTCGAAGAGTCGGCGTAGCAGATAGACTTGAATGACGCTGGCTG
TAATGAGCGCAGCCGACTCGAAAAGTGCCTTGTGGATGGCCCTCCTGCTCATGTTCTCGT
TCACTGCACCACAGCAGGAAAGACGTGGTTAAATGACAAAGGGATTAGTTTATAAAGATT
GTGAGAAGAGTGCAATCTACTGGCTGCTTGGGCAGCAGGCATGAGCTCATACACTGAAGT
GATAGTCATCGAAAGATTTCTAGGCAAACCATGGTAGTACTTGGCCAGTCGGTGTTGCAC
TCACCAGAGGTTATAACAGATTCCGAAATTGCAGAGAGCCTTCCACAAACACTGGCCAAT
CCTAACTTGTTCTGGTGGCAGACTAAATTTTAGATAAGTCCAACGTGCGGGCTGCTGGAG
TAAAGTCTACCTGGGCATCGAGCACCAATAACTGCCAAAAACTAGCATAATGCTCCTCTC
CAACCGAGGGGATAGAAACATGCCATCCTCATTTAGGTATACTTATTAGGTTATTATTAT
T



Homology of Contig U35_40771 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None