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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26344_PI390587928Hv_44K_v2GTTCAAACATAATATTGTGTGAAAAGTTAAGAGCTGGATATTCATGCAGCAGCATTGCAT510GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0270.0940.8031.8251.3652.511
Raw 14.10377.124584.5322019.875542.5421090.259



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_63093.187502e-247966 - 802510060 / 60minus ABC05256 ABC34447
MLOCMLOC_63091.224072e-241438 - 149710060 / 60minus ABC05256 ABC34447
MLOCMLOC_63093.255922e-244623 - 468210060 / 60minus ABC05256 ABC34447
MLOCMLOC_63091.123652e-241424 - 148310060 / 60minus ABC05256 ABC34447
JLOC1JLOC1_41317.147388e-25726 - 78510060 / 60plus
JLOC1JLOC1_41315.133458e-252420 - 247910060 / 60minus
Harvest21ABC344475893e-25511 - 57010060 / 60plusABC34447
Harvest35U35_384665893e-25511 - 57010060 / 60plus



Contig Sequence (589 bp)

>U35_38466 589 Hv_44K_v2
GCTCTGCCTAGGCAAGAATCCATGTGTGCGCGCGTGTCGCCGTCGTCTTCGTCGCCGCCG
CGGCAACTGAGATCTGGTCCGGTGGCTAGGCAGGACATTTCATTTGCTCTCTTCTACGGC
GGCCGTTCGCCTAGAGCTAGCCTAGGGGCCACGCTTTTTCCTTTTACGGGCAGCGACCTC
AGCCGAATTCAGCGACGCCGTCACACTCGATAACTCATGGGCACTCCACTCGCTGGGCAT
CGGTTCTCCCCGTTTCCCCACCGGGATTCACCACGGCGCCACCGCCATTTGTTGGACATC
ACATCGGACGTGTGGCATATGTGATCTTGCGTACGCAGTGAAAAGAAGATTACTGTCTAC
ATGTAGCTAATCATCTTCTTCTGGAATGGCTGAGGAGTACTGAGATATCACCAACGATCT
TTCAAGGAATGATGGCCAGATGGTGATGAAATGTAAGAGACGGAGCAAAGATAAGCGACC
CTCTCTTCCAGGTCTGTTCGTTGGCCGAGAGTTCAAACATAATATTGTGTGAAAAGTTAA
GAGCTGGATATTCATGCAGCAGCATTGCATCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_38466 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None