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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26313_PI390587928Hv_44K_v2AAGGACAGTCGTGACTGTTGTAAGACAGCGCACTTGGATTTAGAGTTTGCTATCAAAAAA746GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_68729.140499e-22431 - 48510055 / 55minus ABC21178
JLOC1JLOC1_45501.140565e-223469 - 352310055 / 55plus
Harvest35U35_209778173e-25747 - 80610060 / 60plus



Contig Sequence (817 bp)

>U35_20977 817 Hv_44K_v2
GCTTAGATCCCACCTTGATTCTCTGTGCTCCAACTTAAGATCTCACACGATTACCAATGT
GCAATCCAACAATGACAAGGTTTCCTTAATTTTAAGAGAGAGTTTCATTGGTTCTTTCCC
GGCCCGAGATAGGCCTTTTATGAAGCTGTTTCTGGACACACAATTGTTCTCGGTACATAC
AGACCTAGTTCTCTCCTTTTATCAGAAGGACTGAGTCTCTCCCCTGACGATTTGACTGTG
TCATCAGCGACATGATTTTTCCAAGCCTTTCAACATTGAGCTCAACTGTACATACCGTCG
GAGAAGCTGCCTTTTATAACATTGGCAGCTCATAGTGGACTAGAAGCTGCAAGGGACCAA
CCCATATACTGTTGGCAAAGCTGTAGATGGTTGAGATCCAGGTAATGTTATACCAGAAAA
TGCCTGTTGGGCTGTTGTAAATTAGGTCTGCTTGCTGTGCTACATCAGAAGACTTTGTAG
GCAGTAGTCGTTGCCACAAGGAACCTTCCTGGCTTGTTGTTCCTACAATGCAGTGCACTC
CAAATGGTCCGTGTTCACTGCAAAATTGCTGGGCATGGGATATCAATGTTAGTTTTGCAG
CTAGTTTGTATATGGGGAGGAAACTGGAAACATATACCCGTAATTTAAGCACAAACTAGA
GTTACAACTGATGCAATGTCGAAGGACTATTTGTATCTCAATTTTGACGCGTGATATTAT
GTGTTGTACAGTTTGAAGTCATATCAAAGGACAGTCGTGACTGTTGTAAGACAGCGCACT
TGGATTTAGAGTTTGCTATCAAAAAAAAAAAAAAAAA



Homology of Contig U35_20977 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None