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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26200_PI390587928Hv_44K_v2AGGTTCGCGCAAGCCTTGCGTGAAAGTAATGAATAAATGTTTTTTCAATGGTACAAAAAA652GeneList: plum2
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0520.2051.6112.4671.3601.743
Raw 6.00743.596284.891606.041137.383187.541



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC215637233e-2512 - 7110060 / 60minusABC21563
Harvest35U35_271477233e-25653 - 71210060 / 60plus



Contig Sequence (723 bp)

>U35_27147 723 Hv_44K_v2
GCACCGTGACCGCCGTGGCTTCCTTCGATTTGGAGCTGACATCCCGGACCAGTCGCATGC
ACGGAGCACGCCGCTGCTGCACGGGGACCTCGCCCAGGGAGGAGGCATGTACTACGTCGG
CGTCGTCGGCGTTAGCCTGGGCGGCCGAAGGCTCACAGCGATCACGCCGGTGATGTTTGA
ACTCAACCGGCGTAGCCTCCGCGGCGGGTGCATCATCGACGTCGGGACGTCGCTCACCTT
GATGGCCACGGCACCGTACCATGTCCTGGTGGCTGAGTTGATTGCGCACATGAGGAGCCG
CGGGGTGCAGCATGCCATTTTTTCCCCAGGGCAGAAGCACTGCTTCCGCGGGAAGTGGGA
AAGTATCCACAGACACTTGCCGAGTGTGACGCTCCACTTCCAGTTCCACCCGGAATCGGT
CGCGCTCTTTATTAGGCCGGAGCTGTTGTTTGTGGCGATGACGGGCGAGCGCACTGACTA
TGTGTGCCTCGCCATCGTGCCCTACGCAGAGAGGACGATTATAGGCGCGGGGCAGATGCT
GGACACGCGCTTCACGTTTGACCTCCAACAAAATCGCCTCTTCTTTGCTCCGGAGCAGTG
CCATCTAGACACTAGCGCAGTTAGCTAGCTAACAGCTACATCCCCATATTATAGGTTCGC
GCAAGCCTTGCGTGAAAGTAATGAATAAATGTTTTTTCAATGGTACAAAAAAAAAAAAAA
AAA



Homology of Contig U35_27147 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None