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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26130_PI390587928Hv_44K_v2AGCTGGTGGACGAGTTCTACAACGGATACGGCGAGGACGCCGTCACCAAGGAAGCTGTGG263GeneList: darkred
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.8422.0633.1050.7190.6070.894
Raw 9.03936.12249.51416.6622.7058.308



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37000113272e-24265 - 32410060 / 60plus None
MLOCMLOC_19571.113952e-241074 - 113310060 / 60minus None
MLOCMLOC_19571.212802e-24959 - 101810060 / 60minus None
JLOC1JLOC1_13561.112798e-25254 - 31310060 / 60plus
Harvest35U35_121748803e-25264 - 32310060 / 60plus



Contig Sequence (880 bp)

>U35_12174 880 Hv_44K_v2
ACACGCTACTCCAAAATCCTGCAACTGCTTTGGAAAACTGGTGGCCAACGCACGAGCGGC
GGCGAGCCCAATCTCCATCCTTATTCCGACTTCACAGCAACCACCGGAGCCGCCGATCAT
GGAGTCCTCGCCGACGTCGTACAAGAAGGCCACGGCGGCGCTGGACGAGGCGGCGAGGGC
GCGGCTGCGCGGCCCGTTCTTCGGCGGCACCACGCCGTCCGCCGCCGGACACGAGGACGC
CCACGACGACGACGGCCTGGTGGAGCTGGTGGACGAGTTCTACAACGGATACGGCGAGGA
CGCCGTCACCAAGGAAGCTGTGGCGCCGCGGCCCGCTACCACGTGGGCTGACGCGCTGCG
AGCGGCGCTGGCAGATGCGGCCGCCGACGCGGCAGCGGCGCGGATCCGCGCCGCCGTGGG
TGCGGGGCCGAACGTCGCTGGCGGTGAAGGGGTCAGGAAGCACGTCGCCGACAGGCTCCG
TGCGAGAGGGTTCGATGCCGGCGTCTGCAGATCGTCGTGGGAAAGAAGCAGCAGCGTGCC
GGCGGCGGGCAGCCACGAGTACGTGGACGTGGTGATCGCAGCGGGCACGTCGACGTCGCG
GTACATCGTCGAGGTCAACATCGCCGCCGAGTTCGAGACTGCGAGGCCCAGCGCAGAGTA
CCAGCAGCTCCTCCTCGCCCTCCCCGCGGTTCTCGTGGCGACGCCGGAGACGTTCAAGGA
GGTCGCCGCGGCAATGTGCGCGGCGGCGGCGGAGTCCATCCGAGGCGCGGGCATGCACGT
GCCGCCATGGAGGCGCGCGCGGTACGTGCAGGCCAAGTGGTCCGGCAAGTACAAGCGAGC
GGCGCCCGTGGCCTTGGCCGTGGCCGCGCCGTCGGAGACG



Homology of Contig U35_12174 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None