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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26033_PI390587928Hv_44K_v2ATCTATTGTGTGCTCTGTTGCCAGTATATGCAGATCTGACTTGGCTGTACAAAGTCTTCT539GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.9262.8471.1980.8560.4030.655
Raw 85.008197.38470.35676.64412.92223.280



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC525746023e-25540 - 59910060 / 60plus
Harvest35U35_504446023e-25540 - 59910060 / 60plus



Contig Sequence (602 bp)

>U35_50444 602 Hv_44K_v2
TCAAGAAGTCATTCTGGCGCTAACAGGACCGAGAAGAGGGGAAATGATTCAAATTTCTTA
GGGTGGGTGGTTTCTTCTAGTCTTGATGTAGTCAGGAATAGTTGCAATATCAAAAATATT
GGTGGTTTTCTGGGGAATAGTGCAGTGTTTGCTGTTGGCATGATTACAATGTTGCAGCTG
CGTTTGTTGGCTTCTGGAGAACAACGTCCATCTTGTGGTAAATACAGCTACAGAAGGATC
AATGGCGATGATTCTTCACGGTCTCTGGCAGGGCGTAGTAGAATGGGTCATCTCGATGTG
TTCTTAGCCAAAAGTTGAGGGGGGGTTCTGTGTCGCCTATCTGATACGTTGTTTGTACAT
ATTTTGTTAGCATCTTATCTGCCATTTTGAACGAAGTTTCTATTTTTTGGGTGCCCATTG
AGTTTGCATTCTAGGTATGGATCGCATTAGCTAGGCTAGCTTACCTCTGTTGCTTTCAAT
TCCTTGAAATGGACTATTATAATCCTTGTTGTAAGCAGCCAAATGTTGTATTCATGTGAA
TCTATTGTGTGCTCTGTTGCCAGTATATGCAGATCTGACTTGGCTGTACAAAGTCTTCTT
TT



Homology of Contig U35_50444 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None