- Probe CUST_25961_PI390587928
- Source Contig U35_36524
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_25961_PI390587928 | Hv_44K_v2 | ATCATCACTATCTCGCTAGCCGGATACTATGCCACTTATTCTGGAAATAGCACATCGTGG | 161 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK354486 | 1529 | 2e-24 | 1268 - 1327 | 100 | 60 / 60 | minus | ABC03588 ABC40887 |
| MLOC | MLOC_4856.1 | 1042 | 2e-24 | 588 - 647 | 100 | 60 / 60 | plus | ABC03588 ABC40887 |
| JLOC1 | JLOC1_3078.1 | 2295 | 8e-25 | 1841 - 1900 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC31223 | 561 | 3e-25 | 314 - 373 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC03590 | 1125 | 3e-25 | 192 - 251 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC03588 | 1004 | 3e-25 | 754 - 813 | 100 | 60 / 60 | minus | ABC03588 |
| Harvest21 | ABC03587 | 867 | 3e-25 | 222 - 281 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC03585 | 1416 | 3e-25 | 1215 - 1274 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC40887 | 406 | 5e-23 | 176 - 231 | 100 | 56 / 56 | plus | ABC40887 |
| Harvest35 | U35_36524 | 364 | 3e-25 | 162 - 221 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_33264 | 640 | 3e-25 | 104 - 163 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_31079 | 561 | 3e-25 | 314 - 373 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_496 | 837 | 3e-25 | 587 - 646 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_417 | 1529 | 3e-25 | 1244 - 1303 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_381 | 1004 | 3e-25 | 754 - 813 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_245 | 1458 | 3e-25 | 1208 - 1267 | 100 | 60 / 60 | minus |
Contig Sequence (364 bp)
>U35_36524 364 Hv_44K_v2 CGGCCGAGGTACATACACGAAAGAACAACCGAGTCATGTGCACAGATGAACGCATACCAG CACGCAAATGATAATTACAAAGTAGTAATAATCATCATGGGTGCATGGAACAAGAGAAAC TAAAAAGGGATGATGGAATACAAGGAATGCAAAAAAGATGCATCATCACTATCTCGCTAG CCGGATACTATGCCACTTATTCTGGAAATAGCACATCGTGGCTCCGGACGGGGTCGATCT CCTCCTCCTTCGGCTGTCATATGTGAGCATCACATCAATTGTCAGTCATCGGCGGCCCTC ATGGCGATGCCGGTCTCACCGGCCGCAAGATATCATCGACACCTACGGTGGCTGGGGAGC CCAT
Homology of Contig U35_36524 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |