- Probe CUST_25697_PI390587928
- Source Contig U35_46663
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_25697_PI390587928 | Hv_44K_v2 | GGTCCTTGTTGTGGTTGTACTTTGTAGGTAGTTATATTGTAATAGGTAGTAGTGACTATA | 151 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_74484.9 | 2727 | 2e-24 | 86 - 145 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
MLOC | MLOC_74484.1 | 2036 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
MLOC | MLOC_74484.6 | 2611 | 2e-24 | 91 - 150 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
MLOC | MLOC_74484.2 | 1431 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
MLOC | MLOC_74484.10 | 1373 | 2e-24 | 85 - 144 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
MLOC | MLOC_74484.7 | 1087 | 2e-24 | 86 - 145 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
MLOC | MLOC_74484.3 | 1555 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
MLOC | MLOC_74484.4 | 2544 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
MLOC | MLOC_74484.5 | 1512 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
MLOC | MLOC_74484.8 | 1046 | 2e-24 | 86 - 145 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
JLOC1 | JLOC1_49635.3 | 1289 | 8e-25 | 1136 - 1195 | 100 | 60 / 60 | plus | |
JLOC1 | JLOC1_49635.2 | 1297 | 8e-25 | 1144 - 1203 | 100 | 60 / 60 | plus | |
JLOC1 | JLOC1_49635.1 | 2404 | 8e-25 | 2251 - 2310 | 100 | 60 / 60 | plus | |
Harvest21 | ABC47063 | 569 | 3e-25 | 152 - 211 | 100 | 60 / 60 | minus | ABC47063 |
Harvest21 | ABC25086 | 656 | 3e-25 | 143 - 202 | 100 | 60 / 60 | minus | ABC25086 |
Harvest35 | U35_46663 | 569 | 3e-25 | 152 - 211 | 100 | 60 / 60 | minus | |
Harvest35 | U35_11536 | 656 | 3e-25 | 455 - 514 | 100 | 60 / 60 | plus |
Contig Sequence (569 bp)
>U35_46663 569 Hv_44K_v2 TTTTTTTTTTTTTTTTTGCGACTTGGCCTTTTTCATTAATTTGGTCCAACTTTACAGCTT TCTATTTCTCACATTTTCACAGTACACAAAAGACAAACATTTCAAATGTTACACAAATAA ATTCTTGAAATGATAGCCAAAATTAACCTCTTATAGTCACTACTACCTATTACAATATAA CTACCTACAAAGTACAACCACAACAAGGACCCTTGAGAAAGATCCATCAGTAGGTTCCTC ATCCATTATTGAGTCTCTGCGGATGAAATAGCTGGCTGAAAGCTGGCTACCACACTTACA GCTGCAACTGAAAGCAGAAAGCCTAACGCGAAGATCTTCATCTGCCTATACGCGAACTCC TTTCCCACGCAGATCCTCGGACTAGCCTCGAAAGCTGTGAACTTGAAAGGGCTTTCTGGC TGGAACACGCTGTGTTCGTCGAGCCACCGCTCGGGCCGGAAGACCTGGACGTCATCGCCC CACACGCGCTCCATCCAGCCCATGGCATAGGGGGCGTAGAACACCATGTTGCCCTTGCCG ACGCTGAATCCGTTGGGCAGCACGTCGTC
Homology of Contig U35_46663 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |