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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_25695_PI390587928Hv_44K_v2GATCCATGGAATACAAAGACATAGGCTCCGAGATGATACCCATGATTTGTTCGTAAAAAA464GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_72102.112079e-221040 - 109410055 / 55plus ABC47068
MLOCMLOC_72100.318729e-221766 - 182010055 / 55plus ABC47068
MLOCMLOC_72100.422149e-221866 - 192010055 / 55plus ABC47068
MLOCMLOC_72100.123959e-222047 - 210110055 / 55plus ABC47068
JLOC1JLOC1_47963.224175e-222041 - 209510055 / 55plus
Harvest21ABC470685353e-25465 - 52410060 / 60plusABC47068
Harvest21ABC218906352e-22544 - 59810055 / 55plus
Harvest21ABC504446798e-21163 - 2179854 / 55minus
Harvest35U35_466675353e-25465 - 52410060 / 60plus
Harvest35U35_351168352e-22707 - 76110055 / 55plus
Harvest35U35_132796372e-22544 - 59810055 / 55plus
Harvest35U35_485566798e-21163 - 2179854 / 55minus



Contig Sequence (535 bp)

>U35_46667 535 Hv_44K_v2
CCGACACACACGCAGGGCCTGGGGGATGAAGCAGAGCTCGGACTTCTGAGAACCTCGCAC
AAGTCCTTGCTGTCATGCCATGACCAGACATCATTCGAAGGGATGAGCATGACGATGAGC
TTCCCGACGAGGAGCCGGTGTTTTTGCCGGTTGAACGACCTCACCATGTCGACCGCGTGT
TCCTTGACAGGTACCAGGAAGAAAAGATCTGCTCGTGCCATGTCGAGGTCGTTCGACCAG
CAAAACGGCGGCGGACTTCGTCTACCGCAAGGCCCGCGGTGCCGACGGTGGCCTTCCGGG
GCCGCGGGTCACCATGAGCTTCAAAGTTATCTCCTCTAGCAGCGGCTAGACGGCGTCAGC
TATGATGAAGACATGCTGGCTGGCAAAACGCCCCTTGCCCTTCCTGTTTTTGAGAATGCG
GATTTGGTTCTGCACATGAAGTATATGGTTGTGTGTATCACCTGGATCCATGGAATACAA
AGACATAGGCTCCGAGATGATACCCATGATTTGTTCGTAAAAAAAAAAAAAAAAA



Homology of Contig U35_46667 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None