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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_25601_PI390587928Hv_44K_v2GGTCAATCGTAGGAAAGGAAGCAAAAAATTGTTCATCGATCAGAGTATATGTGATATGAT948GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 3.1873.1871.3590.6980.1770.278
Raw 166.935267.90698.38886.1206.28912.466



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC068134973e-25406 - 46510060 / 60plus
Harvest35U35_1728310593e-25949 - 100810060 / 60plus



Contig Sequence (1059 bp)

>U35_17283 1059 Hv_44K_v2
GCAACCCCGAGCGCACACACACACAAAAGGAGAGGAGGCGGAGGAAGACGAGCGAGCTTT
TCTTGCTTTCGGTGCCATGGCGAGGTGGACGGTGCAGCCGTGCGGGCTGCTGCTGCTGGC
GGCGCTGGTGGTGGTTGCGGTGGCGGACGACGGCGGCGAGAAGTGCACGGGCGGGTGCGG
GAACCCGTGCGGCATCCCGTGCACATACTCCAGCCCGCCGCCGCCGGAGCCCGTGCTGCC
CCCGCCCGTCTACTACCCGCCGCCGGCGCCCGTGTACTCCCCGCCCCCGCCCGAGGCCGT
CTACCCGCCGCCCACGCCCACGGCCGACTGCCCCCCGCCTCCCACCGAGCCGTCGCCGGG
GTACACGCCCGCGCCATACACCCCGACGCCGTCCGGGGGTGGGTACAACCCGGCGCCGTC
CGGGGGCGGGTACAACCCGACGCCGTCCGGGTGGTTCACGCCGCCCAACATGCCGTCCTA
CCTCACCCCGCCGGGGCCGCTCTACCCGCAGGACCCCGGCTTCCGGCCCAACGCCGCGCC
GGGCATCCCGGCGGCGTGGCGCGCGGCCGCGATCGCGGCCGTGGCGGTCGCCGGAGCACT
GGCCTTGTGATCGGTCGTCACAGGAGCAAGGCACACGCGTATCCGTCCGGGGCATGGAGC
TACCTGCTGCACCGGCCTGTCGGTCCATGGAGCCGGCCGCCGTGGTGACCATGGCGATCA
AAAGCGCGCGGGCATGCGTACGTTTCAATTGGATTCCGTTGATTCCGTGTTGATAATAAT
AAGTAAGGTTATACGTGTTAGGGGAGCAGCCGGTCGCGACGCCGGCGGTAATAATTTTTT
CTTTCCGTTGATTTCTCATTCGTGCTGTGTTCATGTCCTCCATGTGGTTCATCGATCGTT
CTTGCCGTGCATATGCATGTACTTACTTACGTTGTGTTTTTTTACTTTGGTCAATCGTAG
GAAAGGAAGCAAAAAATTGTTCATCGATCAGAGTATATGTGATATGATACTGATATGATA
TATGTCTGCTCTGATTACTCTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_17283 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None