- Probe CUST_25570_PI390587928
- Source Contig U35_31587
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_25570_PI390587928 | Hv_44K_v2 | TACAAGAGCGGCAAGATAGAGCGCCTTCACCGGCCTCTCCGTGCGCCTCTACCTTCCCAA | 98 | GeneList: thistle2 MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.644 | 1.091 | 1.794 | 1.438 | 0.790 | 0.768 |
| Raw | 19.130 | 50.978 | 72.267 | 87.270 | 17.722 | 19.264 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_31587 | 272 | 3e-25 | 99 - 158 | 100 | 60 / 60 | plus |
Contig Sequence (272 bp)
>U35_31587 272 Hv_44K_v2 AACACCAAGGCCCAAGCCAAACACCATCTCCACTCTCCACAGCCATGGACGCCGACGCCG ACACGGTGGTGTTCGAGGCACCGGCGCACTTCCGCTTCTACAAGAGCGGCAAGATAGAGC GCCTTCACCGGCCTCTCCGTGCGCCTCTACCTTCCCAAGCTCCAGGACCCTTCCGCGAAG CTCCCGGTCCTCGTCTACTTCCACGGCGGCTCCTTCCTCATCGAGTCGGCCGACTCCTCC ACGTACCACAACTACGTCAACGCCCTCGCCGC
Homology of Contig U35_31587 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |