- Probe CUST_25507_PI390587928
- Source Contig U35_43596
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_25507_PI390587928 | Hv_44K_v2 | GTTGCAATGCTGTCGAGAGAAATGTCTTTCATTGACTTGAACTCTTGGATATTGCCGCTA | 3 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_12602.1 | 1587 | 2e-24 | 1370 - 1429 | 100 | 60 / 60 | plus | ABC40469 |
| JLOC1 | JLOC1_8457.1 | 1768 | 8e-25 | 1373 - 1432 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC40469 | 485 | 3e-25 | 4 - 63 | 100 | 60 / 60 | minus | ABC40469 |
| Harvest35 | U35_43596 | 485 | 3e-25 | 4 - 63 | 100 | 60 / 60 | minus |
Contig Sequence (485 bp)
>U35_43596 485 Hv_44K_v2 GATTAGCGGCAATATCCAAGAGTTCAAGTCAATGAAAGACATTTCTCTCGACAGCATTGC AACCACTTCTACACAAAAACGCAAAGCAAAAGGTTCAAGTGCCCCCCACTGTTTTCCGTC GTCTAATGGGATTTATATTTCTCCCGTGCGAACTCCATCAGTATAACTGAAGTTTTTCAC CGGGCGGCTCCCAGTATGTGTGACAGACGAAACAATGAAAAGGCGCTTGCTCGGGGCATC AGTTTTTATCTTCATCACTTTTCACTGAACTTGCTGCCAATACTTCATCACTTTTCTCTG AACTTCCTGACGTCTCGAACATCTTGGAGAATGCCTTCCGCTCCAAATTACGTCTGTCAG TAACCTTCTTCTTTGCAGCAGCCAGCTCCCGTTTGATTCCTCCATCGTTTGGCTCCAACT CCAACGCACGCTGGAAGCTCTCAACTGCAGCATCAATATTCTTGAGTACCATGCGTGCCT GTCCT
Homology of Contig U35_43596 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |