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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_25452_PI390587928Hv_44K_v2CATCCTTTCATCCAAGCAAGGCCGCTTACTTTTGTTTTAAGTCAAAACTATTTTAAGTTG829GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.4880.4070.5212.4604.2016.811
Raw 3.1443.6746.35463.97232.43257.240



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_198699063e-25830 - 88910060 / 60plus



Contig Sequence (906 bp)

>U35_19869 906 Hv_44K_v2
GAGCGGCATGGACTGCGGCGGTGAGGAGCAGGCGAGGCAGAACGGCGACCCGGCGGAGTG
GAAGAAGGTGGCCGAGCTCCGGGCCGTGGTGGAGGCGCAGGACCCCGCAGCCAAGGAGGA
GGACGACTTCATGCTACGGCGGTTCTTGCGTGCCCGGGACCAAAACATCAACAAGGCATC
GTCGATGTTCCTCAAGTACCTGAGTTGGAAGGGCGCCGCCAAGCCGCATGGCTCCATCAC
CGAGGCCGAGGTGCGCGGCGAGCTCGTGCAGGACAAGCTCTACGTGCAGGGCTTCGACAA
GGTGGGGCGCCCCATGATCTACCTCTTCGGCAACCGGCACTTCGCCGCCAAGCGCGACCT
CGAGGAGTTCAAGCGCTATGTCGTCTACATCCTCGACAACACCTGCACCAAGTTGCCGGC
GGGGCAGGAGAAGTTCGCGTCGGTGGTGGACCTCAAGGGGTGGGGGTATGCCAACTGCGA
CATTCGAGCGAAGCTGGCGGCTTTGGAGATCATGCAGAACTACTACCCGGAGCGGCTGGG
ACGGGTGTTCCTGATCCACGTGCCATACGTGTTCATGGCCGCGTGGAAGATGGTGTACCC
CTTCATCGACGACAACACCAAGAAAAAGTTTGTCTTTGTAGCTGACAAGGACCTCGATGC
CACGCTTCGGGACGCCATCGACGTGTCCCAGCTGCCTGAACAATACGGCGGCAAGCTCAG
ACTTGAGGGATACAAGAGCTCGTCATCACCGCCATCGTGATTTTTTTTGAAGGGTGTACG
ATTGTGTCGGGGTATGTTACATTGCCCTGGTTGATAATCAAGTAATACTCATCCTTTCAT
CCAAGCAAGGCCGCTTACTTTTGTTTTAAGTCAAAACTATTTTAAGTTGAAAAAAAAAAA
AAAAAA



Homology of Contig U35_19869 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g63370.12628e-123protein|CRAL/TRIO domain containing protein, expressed
Brachypodium v1_2Bradi1g01630.12538e-138
Arabidopsis v10AT1G01630.12552e-89Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255