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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_25130_PI390587928Hv_44K_v2CTGTCAGAGAAGTTTTGTAAGTTACTACCCTTGTAATGAGACGATTTGCAGACAATAATT34GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8931.5401.2780.7370.2670.199
Raw 10980.28714173.98710229.1679101.9371175.518960.693



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_70473.117283e-2145 - 1049758 / 60minus None
MLOCMLOC_70473.215733e-2124 - 839758 / 60minus None
JLOC1JLOC1_46769.129072e-212798 - 28579758 / 60plus
Harvest21ABC200236056e-22538 - 5979758 / 60plus
Harvest35U35_386406663e-2535 - 9410060 / 60minus
Harvest35U35_98476056e-22538 - 5979758 / 60plus



Contig Sequence (666 bp)

>U35_38640 666 Hv_44K_v2
TTTTTTTTTTTTTTTTTAACCACAATCACAAATTAATTATTGTCTGCAAATCGTCTCATT
ACAAGGGTAGTAACTTACAAAACTTCTCTGACAGACCGAAAACAGCTCTCATAGTAGCAA
CGTATATATAGCATAACAAAAACAGCTAGCAATCTTAAGACTTGCGGGCTAGCCAGACAG
GCAAAACTTTCGGCAGCAGAGAGATCGCTATCCAACAGGCGACATGCCCAGCATCCATAC
GCCTCTTGTCACACTACTCAACGCGGCCCTTTGCCGCCGCCGCCAGCCTTCCTCCCACCA
CCACCAGCCTTCCCGCCTTTCTTCTGCCCACCGCCGGCGCCCTTCTTCCCCTTGCCGCCG
CCACCTTTGCCCTTCCCGCCCTTCTTCCCCGACCCGGCGCTCCGCTTGTCCTTCTTCATC
CGGGGATCCACCAGCACCTTGCCCTTACCGGTCCTGACCTGGACACCCTTCTTGGCCACC
ACATACTCCTTCTTGGGCCGCTGCGTCGACACCGCCTTGCGGTAGATCTTGTCGATCATC
TTGGCCTTGGACTGCTCGTTGATGTCGCTCTGGTCTGGCACGATGTCCGCCTTCTGCCGC
GCCTTCTCCAGCTTCTTGGCCGCCACACGCTTCTTGCGCGCCTTGGNCTCCGNNCACTTC
TTCGAC



Homology of Contig U35_38640 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None