- Probe CUST_25112_PI390587928
- Source Contig U35_14698
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_25112_PI390587928 | Hv_44K_v2 | GCAACATATTCAACAAATTCTGCATTGGAAAATGATGTCTTTCGAATCATGCTGGTCCTC | 542 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK364404 | 3071 | 2e-24 | 2704 - 2763 | 100 | 60 / 60 | plus | ABC15701 ABC22231 ABC31461 ABC31966 ABC36951 |
| MLOC | MLOC_55409.1 | 405 | 3e-21 | 142 - 201 | 97 | 58 / 60 | plus | ABC15701 ABC22231 ABC31966 ABC36951 |
| MLOC | MLOC_41031.1 | 501 | 3e-21 | 269 - 329 | 97 | 59 / 61 | plus | ABC15701 ABC22231 ABC31966 ABC36951 |
| MLOC | MLOC_28408.1 | 852 | 3e-21 | 103 - 163 | 97 | 59 / 61 | minus | ABC15701 ABC22231 ABC31966 ABC36951 |
| MLOC | MLOC_27137.1 | 651 | 3e-21 | 203 - 263 | 97 | 59 / 61 | minus | ABC15701 ABC22231 ABC31966 ABC36951 |
| MLOC | MLOC_26430.1 | 127 | 3e-21 | 41 - 101 | 97 | 59 / 61 | plus | None |
| JLOC1 | JLOC1_35742.1 | 262 | 2e-21 | 131 - 190 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_26786.1 | 501 | 2e-21 | 269 - 329 | 97 | 59 / 61 | plus | |
| JLOC1 | JLOC1_18355.1 | 271 | 2e-21 | 167 - 227 | 97 | 59 / 61 | plus | |
| Harvest21 | ABC15185 | 885 | 3e-25 | 284 - 343 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_14698 | 927 | 3e-25 | 543 - 602 | 100 | 60 / 60 | plus |
Contig Sequence (927 bp)
>U35_14698 927 Hv_44K_v2 ATTTTAATAAATAGTTTGATTTCTTATCTAAAGAGTGCATCGTTTAGTAGGCGATTCATT TCTATTATGTTATTTCATATACATTTTTCATTTTTAGTATGATAAGGATATATGTTAAAC TCAATGATAAGACAAGATGAAACTTTCCAAATAGAAAGCGGGACCGTTCAATTTCATTAC TCCATGGAATTAAAAGTTGAATTTCATATTTTATAACATAGGTTATCAAACTAGCCCGCG CGAATGCACGGGTTGACGACTAGTATATTTAATTTTGTAAATTGAATAATGGTGATGGTG TTGTTAGTCTTGACGCTTATCTTCTGTTTTGCTCTAAACCAGGTGTAGAACGATCAGAGA CTCCTGCACTAGGAGCTGATATGGTTATTGTGACAATAAGTGCAGTTGATGGGTGGACTG AAGATGACACTAAACTTATCAAACGTGTCATGATTGATAAGGTACCATCAGTTTCATTTT CTCAACAATTTTGTTGATGATGTCCGGTTGCCTGGTTGATGGTTTGCATGCCTTCTGTTT GAGCAACATATTCAACAAATTCTGCATTGGAAAATGATGTCTTTCGAATCATGCTGGTCC TCGGTCATTTTCGACACTTTTGACCTTTGAGCAGCATATGCAGTGGCATAGAACGATCTC AACAAGCCTGGTAGGGTAACCAAAGAACAAGCAATGAAATTGAACCCATTTTCTGGATGG GGTCAAAGATCTATAGGCTGGGATTACTGTTGTCACTGCCCTTTAGATTTGGGTTGTATC GTTGTGTATTATATTTGCTATGGAGCTATGTATGTATGGATGCTATGGAACTATATGTAT ATATGGATGCTATGGAATTTTGAATGTATGGATGCTATGGAATTTTGATATATGGATCAT GAAATTTGTTAAAAAAAAAAAAAAAAA
Homology of Contig U35_14698 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |