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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24_PI390587928Hv_44K_v2ATCTGTGATGGCAAGTGCAAGGACATCAAGCTTACCTACTTCATCATGATCTTCGCCTCT469GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_54046.314452e-241142 - 120110060 / 60minus None
MLOCMLOC_54046.218422e-241106 - 116510060 / 60minus None
MLOCMLOC_54046.117672e-241147 - 120610060 / 60minus None
JLOC1JLOC1_34771.119558e-25629 - 68810060 / 60plus
Harvest21ABC166126943e-25470 - 52910060 / 60plus
Harvest35U35_78476953e-25470 - 52910060 / 60plus



Contig Sequence (695 bp)

>U35_7847 695 Hv_44K_v2
GGACGCGCGCTCGGTGCCGGAAGCCATGGGGACGCACGCCTCGCCGGACAACAACACGCC
GCCCAAGGATGAGAGGACTGCACGGGAGAAGGCGATCGATGACTGGCTTCCTATCACGTC
TTCAAGGAAAGCAAAGTGGTGGTACTCGGCCTTCCACAATGTCACCGCCATGGTTGGCGC
TGGGGTGCTCAGCCTCCCCTACGCCATGTCTGAACTCGGTTGGGGTCCTGGCATCGCAGT
GATGACCTTGTCTTGGATCATCACGGTGTACACGCTGTGGCAGATGGTGGAGATGCACGA
GATGGTGCCAGGCAAGCGGTTTGACAGGTACCATGAGCTTGGACAGCATGCCTTCGGTGA
CAAGCTCGGCCTTTGGATCGTGGTGCCACAGCAGCTCGTCGTCGAGGTCAGCCTGAACAT
TGTCTACATGGTCACTGGCGGCAACTCGCTCAAGAAGTTCCACGACGTGATCTGTGATGG
CAAGTGCAAGGACATCAAGCTTACCTACTTCATCATGATCTTCGCCTCTGTCCACTTCGT
GCTCTCCCAGCTACCAAACTTCAACTCCATCTCCGGCATCTCCCTCGCCGCAGCCGTCAT
GTCACTCAGCTACTCGACAATTGCTTGGGGCGCCTCCTTGCACAAGGGGAAGGAGGAGAA
CGTGGACTACAGCCTGCGGGCGTCGACGACAGCAG



Homology of Contig U35_7847 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os08g03350.14485e-134protein|amino acid transporter, putative, expressed
Brachypodium v1_2Bradi3g14150.24253e-148
Arabidopsis v10AT5G40780.14464e-120| Symbols: LHT1 | lysine histidine transporter 1 | chr5:16323823-16327082 FORWARD LENGTH=446