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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24939_PI390587928Hv_44K_v2GATATAATTCAGAGTTACCCCTGCACCTTACCTACTCTTACTTCAAGGGGGTCTTCTCTC48GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37244318822e-241615 - 167410060 / 60minus ABC02475 ABC02477 ABC10764 ABC36859
MLOCMLOC_56477.15742e-24207 - 26610060 / 60plus ABC02477 ABC36859
MLOCMLOC_56477.218542e-24196 - 25510060 / 60plus ABC02475 ABC02477 ABC10764 ABC36859
JLOC1JLOC1_36529.119958e-251608 - 166710060 / 60minus
Harvest21ABC370084283e-2549 - 10810060 / 60minus
Harvest21ABC0248214333e-251151 - 121010060 / 60minus
Harvest21ABC024775633e-25227 - 28610060 / 60plusABC02477
Harvest35U35_417924283e-2549 - 10810060 / 60minus
Harvest35U35_116414363e-251151 - 121010060 / 60minus



Contig Sequence (428 bp)

>U35_41792 428 Hv_44K_v2
TTGGGGAGGACAAACCCTTGAATGACACCATGGCCGGCCTGGAGGAAGGAGAGAAGACCC
CCTTGAAGTAAGAGTAGGTAAGGTGCAGGGGTAACTCTGAATTATATCAGTTTTCGCGTG
TATCTTTGTACTGAAAGACGTTGCCGGTAGAAAATGTTTTTTTTTTGAAACCTTCTCTCG
TTCTACGGAGGCGCCGACGGCGTTTGTATGAGCAGCTCCTATGGCGGCGGCGGCGACGGC
GGGGGGGTGAGCGGTTTCCTGGGCTCATACTACTCGTTCCCGTCGTCCGCCGTCTCGGTG
GCCACCGTGCCGTCCTCCTCCTCCGCGTCCTCTGCACCGGGGCACTACTACTCGTCGTCG
CACGACTCGCAGCAGCAGCAGCAGCAGCAGGGCGACGCGGCGGCGGAGTGGAGCTGNNAG
AGCGCGCT



Homology of Contig U35_41792 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None