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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24491_PI390587928Hv_44K_v2AGGATTTCTCTTCCGCAAACTTGTTGAATTTTCTTTCTTCTTGCTTCTCCCAAATCCCCG216GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK248140.132032e-24173 - 23210060 / 60plus ABC05051 ABC29683 ABC39598
MLOCMLOC_18123.419942e-2485 - 14410060 / 60plus ABC05051 ABC29683
MLOCMLOC_18123.117852e-2489 - 14810060 / 60plus ABC29683
MLOCMLOC_18123.319772e-2486 - 14510060 / 60plus ABC05051 ABC29683
MLOCMLOC_18123.219072e-2487 - 14610060 / 60plus ABC05051 ABC29683
JLOC1JLOC1_12529.219158e-2577 - 13610060 / 60plus
JLOC1JLOC1_12529.119068e-2586 - 14510060 / 60plus
Harvest21ABC303864561e-23213 - 26910057 / 57plus
Harvest35U35_72296773e-25217 - 27610060 / 60plus



Contig Sequence (677 bp)

>U35_7229 677 Hv_44K_v2
GCTCGCTGTCAAGGCTCCATTCCTTTTCTTCCACCAAACCAAAGCAGCTTCCTTTCTTTC
GCGCACTAAGCAGTAAGCAGCAGCAGCTTGAGGCTTGAGCACAAGCTCTCTCCTCCTCCT
CCTCTTCCCCCCGCCCCAATTTTATTTATTTATTTATTTATATCTTACCTCCTGCTATTT
ATCCCTCCCATCATCTGTAACTGTTCCCATTAGGAGAGGATTTCTCTTCCGCAAACTTGT
TGAATTTTCTTTCTTCTTGCTTCTCCCAAATCCCCGCACTTGCTCCTGCTCCCTCCCCAT
CCAGGTAGATTGAGCATTTTTTGGTCTAGATCTTTCGCTGCCGCAAGATCTGAACCCCAC
CCACGGCGACGGCGACGGCGATGAGGCCGGACACGCGCCTCGACTCGGCCGCGTTCCAGC
TCACTCCGACCCGCACCAGGTGTGATTTGGTTGTGGTGGTGAATGGGAGGAAGGAGAAGA
TCGCCTCCGGCCTGCTCAACCCCTTCGTCGCCCACCTCAAGGCCGCACAGGACCAGATCG
CCAAGGGTGGCTACACCATCCTGCTCCAGCCCGATCCGGGTGCCGACGCGCCATGGTTCA
CCAGGGGCACCATCCAGAGGTTCGTCCGTTTCGTGAGCACGCCGNAGGTCCTGGAGCGGG
TCACACCATCGAGTCCG



Homology of Contig U35_7229 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None