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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24479_PI390587928Hv_44K_v2GTGGAAGCTTTGCTAAAAAAGATCGCTTACCAAAATTATCAGCCCTGTAATGAAAAACCA771GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.7381.6371.0070.9210.4390.307
Raw 43.51163.21334.58449.4928.5005.129



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_72428783e-25772 - 83110060 / 60plus



Contig Sequence (878 bp)

>U35_7242 878 Hv_44K_v2
GTTCCTCTTCTTCTACCTCCTTTCACCGGCCCGCCGCCGGATCCCCAACCCATCGCGCCG
CCGGATTCCAACTCCGCCGCCGTCGCCGCCGCCGCCGAGCCTTGGGCCCTGCGCGCATCC
CGGTTCCCCCTCACGGTGGCCCCTGCATCCATCCATCCATCCATCCATCCCGACGACGAA
GCCGCCGCCGACCCCTCCCCACCCCAGGTAACATTCTACTGTACCGAGCACATTGAAAGA
TGGTTAACGCAATCAAGGGGCTGTTCATCTCCTGTGATATACCAATGGCTCAGTTCATTG
TTAATATGAACGCCTCAATGCCCGCATCGGACAAGTTCATCGTGCACATCCTTGACCCCA
CGCACATGTTTATCCAGCCTAATATGGGAGATTACATCAAAAGCAAGATGGCGGAGTTCA
GAGACCAGAACAGCTACGAGAAGCCAACGTGAAGGGCCACCATCCATTACCGCGGTGCTA
GCCTCAACAAACTCCATCCAGGGAACCTATGTTGATCATGGCTATGTAGAATGGTTATAT
ATATGCTGAGACCGAACATTATGTTTCACGCGTGATGTTCTGGAATGACTGTTCTGTAGC
ATCGCAGAGTTTTGCGTCTTATGTATCTTGGGAGTGAGCCTTTAGCTGATAATATATTTC
TGGTGATGTTGATCGTGATACCGTGCGCTGAATAAAGTACCACTTCTTATGTATTACTCT
TGTCAAGATGTTGGGTAAGCTAATAATTACTGGAGCTCTGGATAGAGCCAGGTGGAAGCT
TTGCTAAAAAAGATCGCTTACCAAAATTATCAGCCCTGTAATGAAAAACCAAGTAAATGA
ACTAAGAAAGATTTAGTTGTGAGCGGCCGCTCGAGCAT



Homology of Contig U35_7242 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None