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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24465_PI390587928Hv_44K_v2GTAAAATAGAAAATTTTGCGAATATTCGGTTTTACTGATGCGGGGTCTGCTGCACAGGCC524GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36126618452e-241692 - 175110060 / 60plus None
MLOCAK36093220112e-241894 - 195310060 / 60plus None
MLOCMLOC_20996.18882e-24496 - 55510060 / 60plus None
JLOC1JLOC1_14562.17228e-25576 - 63510060 / 60plus
Harvest21ABC503565243e-2562 - 12110060 / 60minus
Harvest35U35_61636893e-25525 - 58410060 / 60plus



Contig Sequence (689 bp)

>U35_6163 689 Hv_44K_v2
TCAAGGATTGGCAAATTCCACTTGGCCGTCGTTTTAGATCACTCAAGCTATGGATGTTCT
TGAGGCTTTATGGCGTGGAAAATCTGCAGAGTTATATCAGAAATCACATACAGTTGGCTG
AACATTTTGAACAACTTGTATTATCTGACTCAAGATTTGAGGTTATGACTCCGAGAATTT
TTTCCCTTGTTTGTTTCCGCCTTCTGCCCCCAACATCTGATCATGACGGTGGCCGTCAAC
TTAACTACGACCTAATGGACACCGCTAACTCAAGTGGGAAGATCTTCATCTCACATACGG
TTCTTGCTGGCAAATTTGTCTTGCGATTTGCAGTTGGAGCACCGCTGACAGAAGAGCAAC
ATGTGGATGCCGCTTGGAAGCTCTTGCAAGATGAGGCCACCAAGCTCTCAGGAAGTGCGT
AGACTATTAGAACTCTAGTAGACCCTTATATCGCGTGGGTTGCAAAAAATGATTTTTACG
GGCTAGCGCAGGCCATGGCAAAAGAGACCTCGCATTGTAGAACTGTAAAATAGAAAATTT
TGCGAATATTCGGTTTTACTGATGCGGGGTCTGCTGCACAGGCCCTAGCCCGTATACTAT
TTTTTTTTTTTTGACAATTTTACATCAATTCCAATGATTGACGGCAAATTTGAATAAAAA
AAAAATAAAAAAAAAAAAAAGCTCGAGGG



Homology of Contig U35_6163 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g25590.14703e-78protein|decarboxylase, putative, expressed
Brachypodium v1_2Bradi1g28960.23918e-78
Arabidopsis v10AT2G20340.14906e-56Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490