- Probe CUST_24347_PI390587928
- Source Contig U35_29875
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_24347_PI390587928 | Hv_44K_v2 | GAACTGTGGAAAACTGAGCGTGTGTTACGTTGCTTACAAAGGAAACTTTTATGCGAAAAA | 214 | GeneList: lightgreen MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.030 | 0.159 | 0.654 | 1.487 | 2.321 | 4.093 |
| Raw | 5.569 | 48.377 | 185.459 | 592.753 | 345.702 | 699.745 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC29414 | 274 | 3e-25 | 215 - 274 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_29875 | 274 | 3e-25 | 215 - 274 | 100 | 60 / 60 | plus |
Contig Sequence (274 bp)
>U35_29875 274 Hv_44K_v2 TCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACAACGATATTAAATT TATTTTTTATGGGGGAGGGCCCACCACAGTAGCTTGCTGCTGGGGTCCTCAGGTGTCGCC CAGGCTTTGCACTGCTGCCGGGGCCTGGCGCACCCCAACCAAAACAAGATGGAAAATTGT TCTTCAGACTTGATGAGGTCTCGTGCATTGTTCTGAACTGTGGAAAACTGAGCGTGTGTT ACGTTGCTTACAAAGGAAACTTTTATGCGAAAAA
Homology of Contig U35_29875 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |