barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24224_PI390587928Hv_44K_v2TGCTTGGCAAATCTGTGTAACCGACTGCGTTCATAACCTGGAAAGTTTTTGACGCTCAAA453GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_18134.16929e-221 - 589857 / 58minus ABC10135 ABC10136 ABC13405
MLOCAK251558.16563e-21600 - 6569856 / 57plus ABC10135 ABC10136 ABC13405
JLOC1JLOC1_12539.17355e-22615 - 6729857 / 58plus
Harvest21ABC101365273e-25454 - 51310060 / 60plusABC10136
Harvest21ABC101356165e-23558 - 6169858 / 59plusABC10135
Harvest35U35_184415273e-25454 - 51310060 / 60plus
Harvest35U35_184406651e-23591 - 6509859 / 60plus



Contig Sequence (527 bp)

>U35_18441 527 Hv_44K_v2
GCACGAGGCGTCAACGAGTTCCTCGTGGAGGGCCTCGCCAACAACCGTGCCTTCCAGAGG
TTTGCTGTGAGGACCAACAAGACTTTGGAGAATCTCTCAACCAAAGCTAAACAAGTGAGG
GAGGAGGTGTCGGAGCAATTTAAGGATGCTCGCGGACCCGATGATCGCTTCAAGCAGTGA
TACCTGCTATCAGCGCTCCTGGTTGTCTGTTCTTGTTCTGGTTTTGGATGCCATCCGCAA
GCGTCCATTGTATAAAATCCGGATCTAAATTATCTTATTTTCTATTTAGAAATTGAGAAC
TAGACGCAGAGCAATGTTAGATTTCTGTAGCCTGAACTAATTCTAGAGGAGAGACTCTCC
TTGGCTGGGCCTCGGTTTTACAAATTTCTATGCTTAATGTTGTTTTATGAGTAATGCCAT
GTACCATTCGCAGTCTATCTGTTGTTATGCCCTTGCTTGGCAAATCTGTGTAACCGACTG
CGTTCATAACCTGGAAAGTTTTTGACGCTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_18441 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None