- Probe CUST_23901_PI390587928
- Source Contig U35_30101
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_23901_PI390587928 | Hv_44K_v2 | AGAACGAGGTGTTGCTCCGGGAGAAGGTGCCCACCAACGAGCTCTACCTCAACCTCCGGT | 107 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK358490 | 3130 | 7e-23 | 1150 - 1209 | 98 | 59 / 60 | plus | ABC13844 ABC17852 ABC41122 ABC44969 |
MLOC | AK369246 | 1396 | 7e-23 | 811 - 870 | 98 | 59 / 60 | plus | None |
MLOC | MLOC_19966.1 | 954 | 7e-23 | 642 - 701 | 98 | 59 / 60 | minus | None |
JLOC1 | JLOC1_13840.1 | 2831 | 4e-23 | 2513 - 2572 | 98 | 59 / 60 | minus | |
Harvest21 | ABC29815 | 167 | 3e-25 | 108 - 167 | 100 | 60 / 60 | plus | |
Harvest35 | U35_30101 | 167 | 3e-25 | 108 - 167 | 100 | 60 / 60 | plus |
Contig Sequence (167 bp)
>U35_30101 167 Hv_44K_v2 GTTCGGGTCCACGGCGAGCTCGCCGCTGGTGAAGGTGCTGCCGAAATGGTACCTGCACCA GAACGCGTGCAAGGTGTTCGAGCAGGACATGGGGTTCCTGTCGTCGCAGAACGAGGTGTT GCTCCGGGAGAAGGTGCCCACCAACGAGCTCTACCTCAACCTCCGGT
Homology of Contig U35_30101 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |