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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_23827_PI390587928Hv_44K_v2TAGCTGTACATGTTATGGGAGTTGTTAGCTTGGTGAATTGTGACGTTTAATTTGTTCCAA489GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.9402.1671.3490.7560.2570.247
Raw 2962.8375327.7132807.9032488.098294.807308.799



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60307.523523e-212267 - 23239857 / 58plus ABC29908
MLOCMLOC_60307.623683e-212283 - 23399857 / 58plus ABC29908
MLOCMLOC_60307.723663e-212281 - 23379857 / 58plus ABC29908
MLOCMLOC_60307.125933e-212506 - 25629857 / 58plus ABC29908
JLOC1JLOC1_39313.126442e-212502 - 25589857 / 58plus
Harvest21ABC299085643e-25490 - 54910060 / 60plusABC29908
Harvest35U35_301535643e-25490 - 54910060 / 60plus



Contig Sequence (564 bp)

>U35_30153 564 Hv_44K_v2
TCAGACACTGATGAAAGATCAGTTTGGCAACTACGTCGTACAGAAAGTCCTTCAGACCTG
TGATGACAAATACTTTGAGATGATCCTGTCAAGCATCAAGGTGCACTTGAACGAACTGAA
GAACTACACATATGGGAAGCATATCGTTGCACGGGTTGAGAAGTTAATCATCACAGGAGA
GAACCGGGTGCGGATGGCGTCGAAGCCCTGCCGATGTCAACAGGAGGCAAAGTGCACCGA
CGCCGGCGCTGATTCTTCTTAAGCATTTGCCATCACTTCTGGTGGAACATGGTTGGACTG
TGGTGAGGTTTTTTCCGTTGGTACAGCGTGCATGTAATGTCATGCCTTGGTAGAGAGGAG
CAAGGTGTTCTCTTTCCTGTCCTGTATAGAATCTGGAGAGTTTTCGGGAAACTTCTGAGT
AACTAGTTGAGTATTAGGGTTCGCCGCTGTATATCTTTTCGGCCATGTAAAAGTTTACAG
GTGGATATATAGCTGTACATGTTATGGGAGTTGTTAGCTTGGTGAATTGTGACGTTTAAT
TTGTTCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_30153 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None