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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_23439_PI390587928Hv_44K_v2ATGTCTTGGATATGGATGTGCAATTGGATGAAAATCCAGGTAGCTTGAAGATGGAAAAAA474GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35743630259e-22997 - 105110055 / 55plus ABC24178
MLOCMLOC_56637.522979e-22474 - 52810055 / 55plus ABC24178
MLOCMLOC_56637.623279e-22471 - 52510055 / 55plus ABC24178
MLOCMLOC_56637.125329e-22481 - 53510055 / 55plus ABC24178
MLOCMLOC_56637.225289e-22481 - 53510055 / 55plus ABC24178
MLOCMLOC_56637.326169e-22481 - 53510055 / 55plus ABC24178
MLOCMLOC_56637.426129e-22481 - 53510055 / 55plus ABC24178
JLOC1JLOC1_36657.227315e-22481 - 53510055 / 55plus
JLOC1JLOC1_36657.127275e-22481 - 53510055 / 55plus
Harvest35U35_236205453e-25475 - 53410060 / 60plus



Contig Sequence (545 bp)

>U35_23620 545 Hv_44K_v2
CCATCTGCTCCATCTCGAGGTCTGGCTCGCCAATGAGTCCGAGCTCGTCGCCGGCTGCGA
CGGCGGCGACGCCGACGGCCGGAGCAGCAGGAGGATGAAGACCCTGCAGAGGCTGTACGA
CGACCAAATGGACAGCGGCACTGCTCAGTTCGCAATGTACTACAAGGAGTGGCTCAAACA
CGGCGGCGATGCCCCGCCCGCCACCCCCTCCGTGCCATTGCCTTCGACGCCGTGGAGTTT
CGACAAGTGGGAGAAGCACTCGTCGTCACTGCGCACGAGCTCCATCAACAGAAATCTGTG
CGTGAACCTCGTCAATAGACAGTTTGCTGTTTGATATGAGTCAATTAGGATAAGAATGCA
CCATCCAAAATTGGTATAAGAATGCCTTGAGATCATCTGATTTTTACAGGTACAATGCCG
TTTTTGGCACCTCGTTTGAGCAGGAGGATGCGAAGCTGCCTGATGAGGCCGAATATGTCT
TGGATATGGATGTGCAATTGGATGAAAATCCAGGTAGCTTGAAGATGGAAAAAAAAAAAA
AAAAA



Homology of Contig U35_23620 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None