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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_23324_PI390587928Hv_44K_v2GAACAAATCTGAATTGTGTCTGTTGTCCCTGTTCCTCCTTTTCTTTTGTAATTTGCATTG621GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2131.3861.0810.9880.4650.456
Raw 1837.1733272.4492253.3633204.210542.879566.204



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_8968.117218e-251587 - 164610060 / 60plus
Harvest35U35_55857133e-25622 - 68110060 / 60plus



Contig Sequence (713 bp)

>U35_5585 713 Hv_44K_v2
CGATATCCCATGCGTGGGCTATACCAAGCACTTGCTGTGGCGTCAATGTGTATTCAGTCA
GAGGCTGCTTCGCGACCACTTATCGCTGATGTTGTGACTGCTCTTTCGTACCTGGCGTCC
CAAATTTATGATCCTAATGCGATCCATGCCTCAAAAAAGGCAGGTGGCGATCAGCGAAGT
AGGGTTTCTGACAGTGGAAGGGCGCTCCTGAAGAATGATGAGGCAGGCAGCTCTGGACAC
AAGTCGGATCGGGATGATTCCCCCAGGGAGCCTCCTCCAGGGATCCTTAATGACAGGGAG
CGGATGGTGGCTGAGGCGAAGATGTGGGGTGCGAACCTGCGGGAGAAGACGCGTGCTGCT
GCCAATGCACAGGGGAGCCTCGATTCTCCAACTGAAACCGGATAAGCGGCAGTCATCAAC
CTGTGGCATCGTGTTTTCTCCGAGTCGACTCTGCTTGCTTTCGATTGGCGGGGAAAGATG
AATTGGGTGCTTTCTGGTGGTGTTAGATGTGTACATTTATAGGGGCAAAACAAAAACAAA
ACAAAACAAGAGGAGAATTGGGTGACTTTGTACTGGATATGGTCGTACCTGTAAATTCTC
GGAAAATTTTGAGACGATGGAGAACAAATCTGAATTGTGTCTGTTGTCCCTGTTCCTCCT
TTTCTTTTGTAATTTGCATTGCTTCATACTTTCCCTTTGTTATATAAAAAAAA



Homology of Contig U35_5585 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g32310.14556e-52protein|serine/threonine-protein kinase NAK, putative, expressed
Brachypodium v1_2Bradi5g08730.24028e-65
Arabidopsis v10None