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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_23269_PI390587928Hv_44K_v2AGTGCCGAATCACTGTTGTACTAGACAAAATCAGAAAGAAGCTTTAGGATAGATGATATA808GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3071.2031.1010.9130.3830.339
Raw 2985.0504324.5833450.4774438.587665.538640.939



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_78190.18753e-22762 - 8209859 / 60plus ABC17133
JLOC1JLOC1_52116.18801e-22762 - 8209859 / 60plus
Harvest21ABC171338923e-25809 - 86810060 / 60plusABC17133
Harvest35U35_226148923e-25809 - 86810060 / 60plus



Contig Sequence (892 bp)

>U35_22614 892 Hv_44K_v2
CTCAGAACCCTCGCCGCCGCCGCCGAGGATGACGTCCGTGCGCAGCGCCGCCGGGGCCGC
GCTGCCGCCGATCCGGATGGCGGTGGAGCGGGCGCGCCAGGAGGCGCTCCGGCGCGAGCT
GGACGGGTGCCAGCTGCTGGCGGGCATCTGGTGCCACGGCTTCACGGTGGCGCAGCTCCG
CAGCATCCGCGCCTCGCTCCCCTCCACGGCGCGGCTGCTGGTCGCCAAGAACTCGGACCT
CGCGGCGGCGGTGGAGGGCACGCGGTGGGAGTCGCTCCGCCCCTGCGCCCGCGGCATGAA
CGCCTGGCTCTTCGTGCGCTCCGACGAGATCCCGCCGGCGCTCCGGCCCTACCGCGACTT
CCAGAAGGAGTGGCGCCTCCAGCTCAACGACTTCACCGGCGCCGTCTACGAGGGCCGCCT
CTACGGGCCCGACGACTTCGCGCAGCTCGAGGCCATGCCCACCAGGGTGCAGTCCTACCA
GTACCTCCTCGGGTGCCTCCAGATGCCCGCCGTCTCCGTCCTCGCCGCCCTCCGCGCGCG
CCAGGAGGCCATGGCGCAGCCCGAGAAGCCGCCCACAGAGGAGGCGGCTCCCGCTCCCGC
TCCGGCGCCGGAGAAGTGATCCCTCCTTCAGCATCGAGGTTCCTCAGTTATTATTACACC
TGCAGCTCCTTTCTCTTTTGCAGATTTTGAATTCAGTGTTAGTAGACAACACCCACAAAA
CCATCATAAGGATGCATTGCTCTGATGTATCATCTGTTCATGAACTGACTTTTGAATGGG
AAGAAATGTGATTGCTAGATCTTTCACTAGTGCCGAATCACTGTTGTACTAGACAAAATC
AGAAAGAAGCTTTAGGATAGATGATATATGTTGGTAAAAAAAAAAAAAAAAA



Homology of Contig U35_22614 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g03030.11924e-93protein|50S ribosomal protein L10, chloroplast precursor, putative, expressed
Brachypodium v1_2Bradi2g37810.12013e-100
Arabidopsis v10None