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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22871_PI390587928Hv_44K_v2TATGAGACTCTTGCTTCCCTTTGAAAGAGGCAGACCCCTACTTCAATTGTCATCTGACGA61GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.6112.3121.1740.7010.3290.373
Raw 648.595834.532405.369369.94663.46977.710



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC213445073e-2562 - 12110060 / 60minus
Harvest35U35_132955073e-2562 - 12110060 / 60minus



Contig Sequence (507 bp)

>U35_13295 507 Hv_44K_v2
TTTTTTTTTTTATTTTCTTTTTTTTGGTTGTGAGAGGTCTGAGTCCACAGCTGGGGAAGA
GTCGTCAGATGACAATTGAAGTAGGGGTCTGCCTCTTTCAAAGGGAAGCAAGAGTCTCAT
AGGGAAGGAGATCCTGCACAGACCAATCCCAATCAGGAAGAGAGTCTTGTTGTCAATGAA
AGCTATTTTTCTATGTCACATATCTGCCTATCTCGTGTTGTGAGCTATAAAGTACCCACC
AGGGGGGGGTGGACCAAGAAAGAGGCAGGCGATTGGGTCCTTCCCATCCTCTGTGATGTC
AGTCTCTTTGTCATTCTTTCACCCTTGCTGAGTAGCGAAGTGAGCATACTCAAGATCCAA
TTCATCAATCATTTGAGTTGGTACGAACATAGGAATCCAGACTCCGCTTGATTCGATCTT
CAGTTTCGACCTTCATCAGTCAGGAAAAAGAAGAAGGACCCACTTATTCCACTCGGAGAG
ACCGAACCAGGCAACAAAAAAAAAGAA



Homology of Contig U35_13295 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None