- Probe CUST_22757_PI390587928
- Source Contig U35_15128
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_22757_PI390587928 | Hv_44K_v2 | CCTTTGCATCTTGATTTACAAGTGTACCAAAGACGGCTTTTGTTGTGCTGTACAAGTTCT | 699 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_75202.5 | 750 | 2e-24 | 629 - 688 | 100 | 60 / 60 | plus | ABC02822 ABC42355 ABC44733 |
| MLOC | MLOC_75202.1 | 2186 | 2e-24 | 2065 - 2124 | 100 | 60 / 60 | plus | ABC02822 ABC17757 ABC42355 ABC44733 |
| JLOC1 | JLOC1_50157.1 | 4007 | 8e-25 | 1181 - 1240 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC50807 | 744 | 3e-25 | 7 - 66 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC47495 | 653 | 3e-25 | 60 - 119 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC02822 | 760 | 3e-25 | 672 - 731 | 100 | 60 / 60 | plus | ABC02822 |
| Harvest21 | ABC44733 | 619 | 4e-24 | 33 - 90 | 100 | 58 / 58 | minus | ABC44733 |
| Harvest35 | U35_48953 | 744 | 3e-25 | 7 - 66 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_46867 | 653 | 3e-25 | 60 - 119 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_15128 | 785 | 3e-25 | 700 - 759 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_45628 | 619 | 4e-24 | 33 - 90 | 100 | 58 / 58 | minus |
Contig Sequence (785 bp)
>U35_15128 785 Hv_44K_v2 GTTCGTCTCACTCTCTCCATCCATTCCCCAATCCCCACGACGAGATCCACCCCAGGCAAG GAGAGAAGGGAGGAGAGAGGCCGGCGGCGGCGGCGGAGCAGGAGACGACCGGAGATGGTG CGGAAGGCGAAGGTCGAGTTCGACGAGAGGCCGCCGGATGACTTCGACCCGAAGAACCCG TACGGGGACCCGGTGGCGATGCTGGAGTACAGGGAGCACCTGGTGCGGGAGAAGTGGATC CAGATCGAGACCGCCAAGATCATCCGTGACCGCCTCCGCTGGTGCTACCGGATCGAGGGC GTCAACCACCACCAGAAGTGCCGCCACCTCGTCGACCAGTACCTCGAGTCCACCCGCGGC GTCGGATGGGGCAAGGACCACCGCCCGGCGGACCTCCACGAGCCCAAGAAGGTGGTCGAG GTCGAGGAGTAGCTCGGCTGCTTCTCCTGCTGTTCCTGGAATGGACAGGTCTTCTCTCCA TCGGAACTAAAAGGAGTAACTTGAACTGCTGCAGCTCTTCTCTTACCTCTGAAGTTGCTG ATAGACCTTTAATAAATGATTATGTTGAAGGAAACATTGCTGTGTGGTGTCTGTATTTTT ATTTTTTTGACGCTTTGAGGATTTAAGCAAATCCTTACTTGGACTTTCCCGCCTTGTTTC CAATTTCGTTCATACAAAAATTGTGTTTAGTTGTCCTTGCCTTTGCATCTTGATTTACAA GTGTACCAAAGACGGCTTTTGTTGTGCTGTACAAGTTCTTTCTATTTAAAAAAAAAAAAA AAAAA
Homology of Contig U35_15128 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os10g42540.1 | 106 | 8e-53 | protein|expressed protein |
| Brachypodium v1_2 | Bradi3g34360.1 | 106 | 6e-57 | |
| Arabidopsis v10 | None |