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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22678_PI390587928Hv_44K_v2ACCCGTTTGTACCGAGAGAAGTATCTGTTTTCCTTAATAAAGGCGTGAAAAAGCAAAAAA361GeneList: red
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2161.6041.1350.9280.2870.321
Raw 1628.4703298.4332095.4402684.535290.872351.550



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_11986.542473e-224074 - 412910056 / 56plus ABC23329
MLOCMLOC_11986.338263e-223618 - 367310056 / 56plus ABC23329
MLOCMLOC_11986.145663e-224395 - 445010056 / 56plus ABC23329
MLOCMLOC_11986.247593e-224597 - 465210056 / 56plus ABC23329
MLOCMLOC_11986.445923e-224384 - 443910056 / 56plus ABC23329
MLOCAK37388045223e-214468 - 452110054 / 54plus ABC23329
JLOC1JLOC1_8003.442021e-224020 - 407510056 / 56plus
JLOC1JLOC1_8003.336651e-223483 - 353810056 / 56plus
JLOC1JLOC1_8003.245761e-224394 - 444910056 / 56plus
JLOC1JLOC1_8003.138101e-223628 - 368310056 / 56plus
Harvest21ABC233294273e-25362 - 42110060 / 60plusABC23329
Harvest35U35_271304273e-25362 - 42110060 / 60plus



Contig Sequence (427 bp)

>U35_27130 427 Hv_44K_v2
GTTCTTGTCTAATAGGGACGTGAAGGACTTGGTGGAGGCCGCTCTTGCTGAGAGCAATTC
GGCAAGGGATAATCTTGTTATCTATACAAAGCTTGTGAAGATAGTGGATCTCTGATCCAT
TCCAGTTTGTAGTTTCCAGGAAATTTGCTTGATGGTAGCAATTTAAAGTGAAGTTATAAC
AGTGTTATCTATACAAAGCTTGTGAAGATGGTGGACCTCTGATGCGTCCTGAGGATGAAG
ATCCTGACTATGGTAGAAGATCCCGAGAAAGGCTTCAACGTTTCCTTTTTTATTTTGAAC
TGATAACTTTTCCTTATGTGATGGCAAATATTAGTCCCGAGTTATAAAGCAACCGAGTCC
CACCCGTTTGTACCGAGAGAAGTATCTGTTTTCCTTAATAAAGGCGTGAAAAAGCAAAAA
AAAAAAA



Homology of Contig U35_27130 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None