barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22446_PI390587928Hv_44K_v2ACGAGGACTTCATCCTCAGGTACAAGAACACGGGGACGAGCCAATGGAGCTACGTGCTGT372GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK250092.118037e-23499 - 5589859 / 60plus ABC06734 ABC42832 ABC44362
MLOCMLOC_21234.119567e-2367 - 1269859 / 60plus ABC06734 ABC42832 ABC44362
MLOCMLOC_21234.214107e-2367 - 1269859 / 60plus ABC06734 ABC42832 ABC44362
JLOC1JLOC1_14737.114534e-2367 - 1269859 / 60plus
Harvest21ABC0673417781e-23413 - 4729859 / 60plusABC06734
Harvest21ABC490361326e-2219 - 789758 / 60plus
Harvest35U35_317975613e-25373 - 43210060 / 60plus
Harvest35U35_1645118731e-23498 - 5579859 / 60plus



Contig Sequence (561 bp)

>U35_31797 561 Hv_44K_v2
TCGAGCACTGTTGGCCTACTAACTTGAGAGGCCTGGACTCTGGAGGGAGGGAGAGGATAT
ATGTACTCCATACTGGCACATCGCTACGCCATCCGATTGGAGGGCAGCAGCGGGGCAGCA
AGCATCCTCTGACCTGCCAAACCGCCCCCAGCAGCAGCAGCAGCACCGGCAGCGGAGCCT
TGGCCACTTCCTCCCTTCCAAGCACCGCCAATCTTGTCCGACCTCCGCGTCCATGAAGGG
CGGCGATCGCATAGAGAGAATTAATCTGGAGCAGCCATCACCAGAAGTCGGACTCGTGCG
ACGGGGACCTCCCCGTCGCCCGCCTCGTCCCCTTCGACTCCGACGCCTTCCACTGCATCA
CCCTCTGGAAGGACGAGGACTTCATCCTCAGGTACAAGAACACGGGGACGAGCCAATGGA
GCTACGTGCTGTCGGCGCCGGACAAGAGGTCCTACGTGGCCGTCGGGTTCTCGGGCAAGG
GGGGCATGGTCGGCAGCAGCGCCATGCTCGGCTGGTCGTCGGGCGGCAAGGGCGTCGCCA
AGCAGTACTACCTGCAGGGCA



Homology of Contig U35_31797 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None