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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22426_PI390587928Hv_44K_v2GCATCTGAACTATGAATCTTGTACATTCTGTTAGCGCCGTTCTCGTAGAATTCCTTTTTT387GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8151.6081.1370.7130.2510.190
Raw 558.727758.348476.629461.22658.03348.267



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_71099.313956e-2461 - 11910059 / 59minus None
MLOCMLOC_71099.119256e-24104 - 16210059 / 59minus None
MLOCMLOC_71099.219226e-24104 - 16210059 / 59minus None
MLOCMLOC_71099.417456e-2461 - 11910059 / 59minus None
JLOC1JLOC1_47218.518733e-241675 - 173310059 / 59plus
JLOC1JLOC1_47218.418583e-241660 - 171810059 / 59plus
JLOC1JLOC1_47218.318533e-241655 - 171310059 / 59plus
JLOC1JLOC1_47218.218503e-241652 - 171010059 / 59plus
JLOC1JLOC1_47218.121573e-241959 - 201710059 / 59plus
Harvest21ABC287954903e-25388 - 44710060 / 60plus
Harvest35U35_294914903e-25388 - 44710060 / 60plus
Harvest35U35_226947763e-25590 - 64910060 / 60plus



Contig Sequence (490 bp)

>U35_29491 490 Hv_44K_v2
GAACTACTGAGGCACGTCGAGGATGATGCGAGGAGAACCGACGACGAAGAGAAAGTCTTG
AGACGGCAGGAGATGTACTAGCCATGTTGGAGGATGGCAGCGATGGATGACGGAGCAGCT
GTGATCAACACATTGCCGGCTACTCCATTGTGTTGTGTTGGCCTGTACATAATTTGGTAT
TGCAGAAGCTGGAAGATACGGTATCCGGGAGACGGCGGAGTTTCACCAGATAGGCCATGT
GCACAGATTGTTGCCAAGTTTTTTTCTCCTCATCCGTAATTTTTCTTTTTTCCCTTTTCA
TTTTTGTTCACAACATTTCTTCTTCTTCTTCTCTTTGTACAGTTTGAGTTTGTTGACTTG
TTCAGAGCGATCAGGCGGAGCTTTCATGCATCTGAACTATGAATCTTGTACATTCTGTTA
GCGCCGTTCTCGTAGAATTCCTTTTTTTTTTTGTTTCAGCACCTATGTTTGAGGATAACC
AATAATTTAT



Homology of Contig U35_29491 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None