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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22132_PI390587928Hv_44K_v2AAATGTTAGCAGAAAATCCCACACGCCTTCTGCTATTGTTATTGGTGGTGGGTTTGCAGG522GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_65103.323082e-24528 - 58710060 / 60plus ABC06065 ABC06066 ABC06067
MLOCMLOC_65103.410322e-24433 - 49210060 / 60minus ABC06067
MLOCMLOC_65103.125052e-241785 - 184410060 / 60minus ABC06065 ABC06066 ABC06067
MLOCMLOC_65103.224132e-241785 - 184410060 / 60minus ABC06065 ABC06066 ABC06067
JLOC1JLOC1_42815.225348e-25602 - 66110060 / 60plus
JLOC1JLOC1_42815.126268e-25694 - 75310060 / 60plus
Harvest21ABC109906533e-25522 - 58110060 / 60plus
Harvest21ABC0606719003e-2589 - 14810060 / 60plusABC06067
Harvest35U35_194016543e-25523 - 58210060 / 60plus
Harvest35U35_1677519003e-2589 - 14810060 / 60plus



Contig Sequence (654 bp)

>U35_19401 654 Hv_44K_v2
GCAGCAACGCACCGTCCCCAGGCAGAGCCCGTAAGCCAGGAAGGAAGGAAGCACAAAGAG
ATACTCTCCCCCCACCCACCTGCTTACAACCAAACTCCCCTCCCCGAGCCCCCCAGAAAT
CCAGCGCGCCGGTTTTGATCCACGGAACACAGATCCCCTCGTGCTCGCTCGCTCGCTCGC
TCCGGCCTGTCGTCTAGATTTGGAGCGCGTGGAACTTTGATGGGCGTGGAGTGAGATCGA
GAGCGGGGACCGTGAATTCCTACGAGGGCCGCCATTCGGCTTGCGCGTCTGCATGAACTG
TTTCGTCAATCTGGGACTCAACTCCAACTCCAACCACTACGTCGCCTGCCTCCTCATCTT
CCTGCTGCATTTCTCGCCGCAGCCGCTGTTAAATCAACCAAATTCTAATCCCAATCCCAG
CGGTAGCAATCGTCAAGAAGGAGAATCCAATCCCAGTAGTAGTGATCGCTAGGGGGAGAA
CAGAGCTCAACAAATGGCCAACAACAACAGTTCATACGGTGAAAATGTTAGCAGAAAATC
CCACACGCCTTCTGCTATTGTTATTGGTGGTGGGTTTGCAGGCATTGCTGCTGCAAATGC
GCTCAGGAATGCGTCATTCGAGGTCGTTCTTCTGGAATCCCGCGACCGGATAGG



Homology of Contig U35_19401 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None