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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_219_PI390587928Hv_44K_v2GACCTGATTTATTGAAACGTTGGATGTAACTTGGAACTATTTATCATTGAATGCTCGTCC418GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_59966.134589e-2231 - 8510055 / 55minus ABC20352
MLOCMLOC_59966.234679e-2231 - 8510055 / 55minus ABC20352
JLOC1JLOC1_39064.430345e-222964 - 301810055 / 55plus
JLOC1JLOC1_39064.330255e-222955 - 300910055 / 55plus
JLOC1JLOC1_39064.214445e-221374 - 142810055 / 55plus
JLOC1JLOC1_39064.114535e-221383 - 143710055 / 55plus
Harvest21ABC203524953e-25419 - 47810060 / 60plusABC20352
Harvest35U35_218885263e-25419 - 47810060 / 60plus



Contig Sequence (526 bp)

>U35_21888 526 Hv_44K_v2
TGAGATCTATCGGTATCCCACTGCCAGCTGAACAAGTTGAGGTGCTGCAGGACAATCTGG
AGTGGGAGGATGTGCAGTGGTCGCAGACCGGCGTGTGGGTTTCTGGGAAGGAGTATCCGC
TCGCCCGTGTGCATTTCCTCTCGGCCAACTAGGGGCAGCACAGCTCTAAGACTCCGGTAG
CAGCAGGCCAGCCCAGCCCAGCCCATGAAGAAACTATTTTCCTCGGAAGAAGGCAGGGGC
TTTCATTCTACAATGCTGCTGCTTCCCACCGTTGTGTGTGTATAAAAGAAGGAAGAAAAG
AGACGAGAAACCCAGCTGTTGTAGGCTGTGCTGTGTCTGTAATTTTCATTACACACCAAT
AACCATTATATGTCTGTCTGAGAGATGTAATTCTTAGTCCTTGAGCTAGGCAAAACCTGA
CCTGATTTATTGAAACGTTGGATGTAACTTGGAACTATTTATCATTGAATGCTCGTCCAT
GAGCGGCCGCTCGAGCATGTATGAGGAGGGCCCAATTCGCCCTATA



Homology of Contig U35_21888 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None