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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21907_PI390587928Hv_44K_v2AAGGACGGTTTGTATTTTCTAGAAACACATGACAGCCGACGTAAAACAGTTCATATCTAA819GeneList: red
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2981.5441.2940.8570.4020.478
Raw 4283.2077650.5975702.9035964.553981.7551278.053



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_13390.613026e-241206 - 126410059 / 59plus None
MLOCMLOC_13390.249066e-244744 - 480210059 / 59plus None
JLOC1JLOC1_9064.247733e-244590 - 464810059 / 59plus
JLOC1JLOC1_9064.148323e-244649 - 470710059 / 59plus
Harvest35U35_116938943e-25820 - 87910060 / 60plus



Contig Sequence (894 bp)

>U35_11693 894 Hv_44K_v2
GGCAATGCTGAAGATAAGGAGGCAGAGGAAACTAGTGAGGTTACGGATAGCAATGCTGAA
AATAAGGGGGCAGAGGAAGGTACTGAGGATATTGACCCTTCAATGGATACCAATGCTGAA
AATAAGGTGGTAGAGGAAGCCGCCGAGGATGCTGACCCTTCAGTGGATACCAATGCTGAA
AATAAGGAGGTAGAGGAAGCCGCTGAGGTTGCTGATCCTTCAGTGGGTAGCAATGCTGAA
AATGATGAGGAGACAGAGGAAGGTACTGAGGTTACTGGTCGTTCAGTGGATTGCAGTGCT
GAAAATGAGGAGACAGATGATGCTACTAAGGATATCGATCCTTCAGCGGATAGGGCTGCT
GAAAATAAGGAGAACATGACCAAAGGCAGCGGCAACACTTGTTCGGGAAAAAGTCAGACA
TCGTCCACGGTTACGGAATCAGAAGACGATAGCACAGAGGTTCAATCATCCAAAACCGCT
CGCAATCGCAAACGTTCGACACGATCAACCGCGAAGAAGATGAGAGAACCTATCCCAGAA
GACTCAGCAGACGTTGCTCCTCCAGCCAGGCGTTCCACCCGCTCAAGCAGAAGACAATGA
AGGCGACGCGGATCGAGCTCAGATTTGGAACAGCTGATGCGGCTGCGTGGTGGTGATTTC
ACCTTGAGATCATGGACGAGTTCTGAAACCACCAGTGCTCTCCTCCGTCCTGACGCTTGT
GTGTACCGTAGCGTTTATTGGTCTAATTTATGCTGGTAATCCGTCCCAGATCCGGACTAC
TGCGTTGACTAATGGTTGTGTAACTGTATTCCTCCCGACAAGGACGGTTTGTATTTTCTA
GAAACACATGACAGCCGACGTAAAACAGTTCATATCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_11693 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None