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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21526_PI390587928Hv_44K_v2ATGTGTACTGTATGTTTCCCATGGAATTCTGTATGTAGTTTCAAGCATTGGGTCTCTAAA536GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_71631.224089e-2284 - 1419857 / 58minus ABC23067
MLOCMLOC_71631.124299e-2284 - 1419857 / 58minus ABC23067
MLOCMLOC_71631.327399e-2264 - 1219857 / 58minus ABC23067
MLOCMLOC_71631.426019e-2264 - 1219857 / 58minus ABC23067
MLOCMLOC_71631.528679e-2246 - 1039857 / 58minus ABC23067
JLOC1JLOC1_47622.326775e-222409 - 24669857 / 58plus
JLOC1JLOC1_47622.228975e-222629 - 26869857 / 58plus
JLOC1JLOC1_47622.19305e-22662 - 7199857 / 58plus
Harvest21ABC230676103e-2515 - 7410060 / 60minusABC23067
Harvest35U35_277286103e-25537 - 59610060 / 60plus



Contig Sequence (610 bp)

>U35_27728 610 Hv_44K_v2
GGTCATCATCGATGGATAGAATTTTGGGCAAACTACGTTCTGCTCAAAAGAAAGCACAAG
GCATGCGTACTACTGTCAGCGAGGATCAGTGTGCTGTCAGTGAAGATCAATGTGCTGTGA
GGGCAACCAAGAAGGCATCCTTGAGAAGAAGTGGCAAGCCTTTCAGCTGCTGTTTCACCT
ATCATGCTTGCTAATTGTAGTATTGTTGGTATCTACAATGATTGTAGAAACCTTTTGAAA
CTTTGGAGCTTGAAGTCAGCCGACAGACAAACCGAAGTTCGACTGCAAATGCCCGCCGTT
GCAGCTGGAGATAGCAGGAATAGTTAGAAGAAGAGAGCCTTGCGCAATCTGATGAACGGG
GATCGAAATTTGGGAGCAAAGCCCACTCTTGTAGCTGATGATATGATATGGATTACTTCA
CTCGGTACTCTGTATCTGTAAACCAAGCAAGTGCTGTAGATCAGGAAGCTCCTCTCTCGA
GCTTCTCTCTAGCTGAACACCGGACTGATCGTCTGGTCCTCGTGGGCTGCCTGATGATGT
GTACTGTATGTTTCCCATGGAATTCTGTATGTAGTTTCAAGCATTGGGTCTCTAAAAAAA
AAAAAAAAAA



Homology of Contig U35_27728 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None