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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21520_PI390587928Hv_44K_v2GTTTGGGTGTATATGTAACCTATTTCAGCCAGGGAGAATTGAATGTTGCAGTATCATAAA25GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_71112.234282e-243273 - 333210060 / 60plus ABC03967 ABC03968 ABC03969
MLOCMLOC_71112.133682e-243213 - 327210060 / 60plus ABC03967 ABC03968 ABC03969
JLOC1JLOC1_47229.134518e-253175 - 323410060 / 60plus
Harvest21ABC0396832383e-253079 - 313810060 / 60plusABC03968
Harvest35U35_397048183e-2526 - 8510060 / 60minus
Harvest35U35_1446232843e-253125 - 318410060 / 60plus



Contig Sequence (818 bp)

>U35_39704 818 Hv_44K_v2
TTTTACTTGTGCTATCGACACTTTTTTTATGATACTGCAACATTCAATTCTCCCTGGCTG
AAATAGGTTACATATACACCCAAACCGACAACAACAGGTGGATCTCCTTGCTACCAATAC
CAAACCGAGCATAGATAGATGAGCATCCCTCTATAAATACAAGCACAAAGACCGGAGCAG
ATCTCCCTGCCGCTTTTGTGGATAGCAAGTACCCATATACACATTCCGCATATTAGCTTA
ACTGAATTGGACGAGCGATGCTGGCGTCATGAGATTTCACTCCGATGGAGCAATTGCTCG
CCTACGCTCAGTCGCTCGTTTGTAGATATCTGGGCAGTGAATAGCGACGAATCTTCAAAA
CAGGTACATGGCCACCGAGGAAATACTACATCAGGCGCCAATTGGGATTTGTCCGTGCTA
TAGACTGGAGTGTAGCCTCAAAGGGAATCCATTCTCAAAAGCATGGCCAAGTACTTCCTC
GATGCGCTTCACGAGCAGAATCTCAATGCCAGCGAGGATCGGTGCTGGAATCTCAGCCAA
GTCCTTCAAGTTTCTTTCTGGTAATATCACCCTCTTGATGCCATATCGATGTGCAGCAAG
CACCTTGTCCTTAACACCACCAACTGGCAACACTAGGCCCCTAAGAGTCATCTCTCCGGT
CATTGCAGTGTCTGCTCTCACTTTTCGGTTACTGAACAATGACACCAGTGATGTTACCAA
TGTCACTCCTGCAGAAGGACCATCCCATGTCAGAGCTAACTGTGCTGACTCCTTAATACA
TCGCCNAGTTGTCCTGTCAGATGCAAGTCACCTTTACC



Homology of Contig U35_39704 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g36300.47241e-56protein|OsLonP4 - Putative Lon protease homologue, expressed
Brachypodium v1_2Bradi4g36160.18874e-58
Arabidopsis v10None