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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21477_PI390587928Hv_44K_v2AACACATACTTATCGGGTGTCAGATCGGTAAGAGGTCCGAGCTGGCCTGCGTCGATCTCC471GeneList: darkturquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.1430.3571.4561.9390.9611.131
Raw 20.67884.290282.388600.461106.027135.170



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3610157713e-21485 - 5449758 / 60plus ABC12433
MLOCMLOC_76756.19503e-21640 - 6999758 / 60minus ABC12433
JLOC1JLOC1_51188.114422e-21255 - 3149758 / 60plus
Harvest21ABC124338416e-22459 - 5189758 / 60plusABC12433
Harvest21ABC124326416e-22428 - 4879758 / 60plus
Harvest35U35_54355313e-25472 - 53110060 / 60plus
Harvest35U35_54368076e-22425 - 4849758 / 60plus



Contig Sequence (531 bp)

>U35_5435 531 Hv_44K_v2
CACGCATCCAAGAAACACCTGAGGGACTGTTGAAGCTCTGCTAGCAAGCGTGCGATGGCA
CCTCCTCCCCACGAGAACGAGATGAGCAGGTCGGAGTCGGCGCCGGCCACGGCGGTGAAG
ACGGTGGACGTGCAAACGGCGGAGACACCGGCCGTGGCTGTGACGATAGTGGGCGTGCAG
ACGGCGGCGACACCGCTTGCACCGGCGGTGGCGGTGATAACGGCCGACGCAAAGATAGCG
GCGACACCGGCAGCGGGGGTGACGACGGTGGACGTGCAGACGGCGGCGACGGAGCTCCAG
GAGCAGCAGGGCGGCATGGCGTACCTGGACGTGAGGACGGAGGAGGAGATGGGGAAAGGG
CCACGTCTGCGGCTCCCTCAACGTCCCCTACTTCTTCGTCACACCACAAGGGACCCCGGG
AGAAGAACCCACGGTTCGTGGAGCAGGTCGTCTTGCTCTTCACCACAGACCAACACATAC
TTATCGGGTGTCAGATCGGTAAGAGGTCCGAGCTGGCCTGCGTCGATCTCC



Homology of Contig U35_5435 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None