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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21451_PI390587928Hv_44K_v2GTTGTTGACATATTCTCTTGACGAGGTTGTGAAATTTCAGCAGTCACTTTTTGTTTTGTA1250GeneList: turquoise
MasterList: Inositol_phosphorylase_phosphatase_and_kinase_Function_Probe_Module



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2021.5031.1700.8560.3810.332
Raw 287.485545.576379.996425.04468.16564.078



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_40375.124571e-222274 - 23329858 / 59plus
Harvest35U35_546113223e-251251 - 131010060 / 60plus



Contig Sequence (1322 bp)

>U35_5461 1322 Hv_44K_v2
ATTAGAAGGGAGCTGGAGAAGATTACTATTCCAGGCGACGACCTCTATCTACCTACTGCA
ACAAACAAGTTAGTACGGGGCATACAGCTGGACAGCGGTATTCCTCTCCAGTCAGCCGCA
AAAGTTCCAATAATGATTACTTTTAACGTGATTGATCGTGATGGGAGCCCAAATGATGTA
AAGCCACAGGCTTGCATTTTTAAGGTTGGTGATGACTGTAGGCAGGATGTGCTGGCCCTT
CAAGTTATTGCCCTATTAAGGGACATATTTGAAGCAGTCGGATTAAACCTGTATCTCTTT
CCCTATGGTGTTTTGCCCACTGGCCCTGAACGAGGCATAATTGAGGTGGTCCCAAATACT
CGGAGTAGAAATCAAATGGGTGAAACAACTGATGGTGGTTTATTAGAGATATTTCAGCAA
GATTATGGTCCTGTAGGGTCACCTTCTTTTGAAGCTGCACGTGAAATGTTTATGATTAGT
AGTGCTGGATATGCTGTTGCCAGCCTGCTTCTTCAACCGAAGGATCGGCATAATGGCAAT
CTTCTCTTTGATAGCCAGGGCAGACTAGTTCATATTGATTTTGGATTTATTTTGGAGATT
TCACCTGGAGGTAACATGGGGTTTGAGAGTGCACATTTCAAGCTAAGCCATGAGATGACT
CAATTGCTCGATCCATCTGGAACTATGAAGAGTGACACCTGGAATCAGTTTCTCAGATTG
TGCGTCAAGGGATACCTAGCGGGAAGGAGACACATGAATGGCATTGTAACTACAGTACAG
TTGATGGTGGACAGTGGACTTCCTTGCTTTAGCAGGGGAGAGCCTATTGCTAATCTTCGG
AAGCGGTTTCATCCAGAGATGAATGAGCGCGAGGCGGCTAATTTCATGGTACGGACATGT
GTCGATGCCTACAACAAATGGACCACCGCAGGGTATGATTTGATTCAATACTTGCAGCAA
GGTATTGAGAAATAGTTAATTTCCCATTTTGTAAATGGTATGGGTCGTGTACATCAATTG
TATGTAGTGCACTAACTCCAGCATGTAGAGTTATATTGAGCAGTTCCTTTGTACCCAGAG
AACTGAGAATGTATGTTAAACAGAGGCGATGTATTTTCCTATTGAAAGACAGTCTAGCTA
GTAGGTAAGCCCAATAGTATCATCAGTTCACTATATCTTTTTTGTAACAGAGCAGCAGAT
TCAATTCTTTGTCTTCTGTTGGCCACATATTGGTTTCTTGATTTTATCATGTTGTTGACA
TATTCTCTTGACGAGGTTGTGAAATTTCAGCAGTCACTTTTTGTTTTGTAAAAAAAGAAA
AA



Homology of Contig U35_5461 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g50320.17850.0protein|phosphatidylinositol 4-kinase PI4K, putative, expressed
Brachypodium v1_2Bradi1g11317.219280.0
Arabidopsis v10AT1G49340.220280.0| Symbols: ATPI4K ALPHA | Phosphatidylinositol 3- and 4-kinase family protein | chr1:18252355-18263967 FORWARD LENGTH=2028