- Probe CUST_21371_PI390587928
- Source Contig U35_33219
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_21371_PI390587928 | Hv_44K_v2 | TTGCCAAATCAGACGGAGAGGGAGAGATAAAAGAGAGAGAAGCTGTCTTAATCCACCTAG | 128 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_37680.1 | 550 | 6e-24 | 419 - 477 | 100 | 59 / 59 | plus | ABC02227 ABC48890 |
| JLOC1 | JLOC1_24422.1 | 1143 | 3e-24 | 416 - 474 | 100 | 59 / 59 | plus | |
| Harvest21 | ABC45009 | 484 | 1e-24 | 277 - 335 | 100 | 59 / 59 | plus | |
| Harvest21 | ABC33212 | 533 | 1e-24 | 279 - 337 | 100 | 59 / 59 | plus | |
| Harvest21 | ABC02228 | 611 | 1e-24 | 341 - 399 | 100 | 59 / 59 | plus | |
| Harvest21 | ABC02227 | 1901 | 1e-24 | 607 - 665 | 100 | 59 / 59 | minus | ABC02227 |
| Harvest21 | ABC48890 | 490 | 6e-22 | 284 - 342 | 97 | 57 / 59 | plus | ABC48890 |
| Harvest35 | U35_33219 | 692 | 3e-25 | 129 - 188 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_14568 | 611 | 1e-24 | 341 - 399 | 100 | 59 / 59 | plus | |
| Harvest35 | U35_14564 | 1476 | 1e-24 | 1237 - 1295 | 100 | 59 / 59 | plus | |
| Harvest35 | U35_14563 | 833 | 1e-24 | 598 - 656 | 100 | 59 / 59 | plus |
Contig Sequence (692 bp)
>U35_33219 692 Hv_44K_v2 TGCACAACAGGCTGATAGTGGACGATTACATAGTAATGGGCACACAACCAAAGCAGCTGG GACAGCAGCACACCAGAGTTCAGACCCAAGCTTAGGTCAACAACCAGTCATTGCGGAACA TGATAATACTAGGTGGATTAAGACAGCTTCTCTCTCTTTTATCTCTCCCTCTCCGTCTGA TTTGGCAAATATCACTGCTTGAGGTGGGGGAAGCACTGGACAAGGTCGCTCTTCGGATGC TTCGCCTCGGCGTGCTCCTTGCACTTTGCTTCAGAGGTGGTGCAGATGAAAGTCTGCAGC GGCCGCTCCCAGGGCCAGGGAAGTGATGCTTCTCGGGTCAAGGAGGCCATGGAGCTTGCT ACCCAGATAGCTTCAATGAAGCTGAGCTGATTTGTTTAGACTCGTCTGGTCTCTTGATAA GTGTGCTTTTAGAACCTGAAGTGTCAAGTGTTTGCTTGGGAAGCGCGGTGGATGCATCAT TCCCTATCCCTGGCAGCGACGACAGCAACCTAGAGGTAAATCGGCTCTGAAGTTGTGGAC ATATCGTCGAGGAGCACTCGGCGGCCCTCACGGCTAGGTTTGTTTGTTTGTTGTTGTTGT TAGGGTGCTTGTGAGGCTATTGTTGTAAGCCTCTGTTGCGGTTATGTGACATGTAACTTG GCCATTTTGTATCTGCTTTCCATCAATATCTT
Homology of Contig U35_33219 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |