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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21361_PI390587928Hv_44K_v2GCCTGAGAAAACAACAGCTCTCATCTGAGAAAACAAGCACCTGATACCATCGGAAAATGC465GeneList: ivory
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9841.0171.5581.1370.7540.843
Raw 171.106256.945367.991386.22398.268122.888



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC341624972e-22433 - 4949760 / 62plus
Harvest35U35_212495283e-25466 - 52510060 / 60plus



Contig Sequence (528 bp)

>U35_21249 528 Hv_44K_v2
TCGAGCACTGTTGGCCTTGGGCAAGGAGACCGTGGCGCCACCCGCCGCTTTCCCCAGTCC
TCTCCTCCTCTCCGCCCCGCTCCAAAAACCACAGTGCCGCGCTTCGCCGCCGTCAGCGGC
CATGGACGTCGCCCCCGGCGAGGCGGCGCCCTCTGGCATGTATTACCACACAAAAAGGAA
GCCTTCTGACCCCATCAGTGGCCTTTCACTTCCTGGTGCAAAGATGGTTGGCAATTGGGG
ATTTGGCAGTGTTACCAAGGACTGGGAAAGTGTGAATGCTCGGAAGTTCCAATTTATAAA
TTTCCTTTCTACTCTGCGTAAGCCCACTCAGAGTTATGTGGCGTGTGCTGAAGCTAATAT
GATTTATAGCTCTGTCGAGCAAACAGAGCAGAAAAAGAGCGAAGTGCTAATAATTCTTGA
TTCGGATAATGAAGATGAAAGCATGGCAGCATACAAACAACTTACGCCTGAGAAAACAAC
AGCTCTCATCTGAGAAAACAAGCACCTGATACCATCGGAAAATGCTGG



Homology of Contig U35_21249 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None