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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21272_PI390587928Hv_44K_v2AAGTGATGATGCGTACATCACAACCTGTGATGGCCTTGCCACGCCTAGTTAAGTTTATGT336GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.0151.7111.1180.8380.3420.352
Raw 1683.0132278.7061280.7891550.631213.162242.699



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_70246.134703e-213191 - 32509758 / 60plus None
MLOCMLOC_70246.431123e-2149 - 1089758 / 60minus None
MLOCMLOC_70246.231753e-21113 - 1729758 / 60minus None
MLOCMLOC_70246.331323e-21113 - 1729758 / 60minus None
JLOC1JLOC1_46613.331312e-213001 - 30609758 / 60plus
JLOC1JLOC1_46613.230912e-212961 - 30209758 / 60plus
JLOC1JLOC1_46613.132072e-213077 - 31369758 / 60plus
Harvest35U35_124304493e-25337 - 39610060 / 60plus



Contig Sequence (449 bp)

>U35_12430 449 Hv_44K_v2
GGGGCAGATCTCGATCCTACAGGACAACGTCTACAAGCCGCCGCTCGACTTCATCTGCAG
CCCCAGGACGATGAAGCAGTTCGGCATGGAGTGAAAGGTTTGCATGCACAGAGGAAAGAA
GAGAGCAAAGGGGTTTATTACAGCAGAGCCCTTGGGGACACATATAGCTTTTATACCTGT
TATTATGGAGAGAGATATAGATGGCCTGCGCCTAGGCTGTGTTCATATGCTTTTATCACA
TTGTCTATTTTTCGAACCCGTGCGGGCCCCCTACATGGTTCGAAAAAACGATGATGTGAT
ATGTTTTCGCGACCGAAGTTTACTGTATCTTCTGTAAAGTGATGATGCGTACATCACAAC
CTGTGATGGCCTTGCCACGCCTAGTTAAGTTTATGTAGTAGCGGCCGCTCGAGCATCATC
TGGAGGGCCCAATTCGCCCTATAGGAGTC



Homology of Contig U35_12430 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None