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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21143_PI390587928Hv_44K_v2TTTTTCCCGTCCAACACTCGAGATCATGACGCAGTTAATTAAAGATTCCCCGTCAAAAAA837GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3691.3701.3190.8550.1500.176
Raw 70.598113.96294.439103.1474.7447.028



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC231669083e-2512 - 7110060 / 60minusABC23166
Harvest35U35_268589083e-25838 - 89710060 / 60plus



Contig Sequence (908 bp)

>U35_26858 908 Hv_44K_v2
GCTTTTGTTCCTCTGTTATAGCAATCACCCGCAGCCTACCGCACTGGCAACAGAACCACC
GCAGTGGAGTGGGTCAAGGGTTTGAGCCCTGGCGCTCCTTTTATATTTTAGGGATTTTCC
CCTGTGTGCACTTGGCAAGATAGTCAGTATACGTGGACTTGCTTCCCCTGTTAGGGACGC
GGCTTGCCCGCGGCTGCTACGTGCGACCCAGCCATCGCACGGCTGTGGCTCACGCAAGCT
CCGCTCCAGAATTCCTGCGAAAAAATAAAATAAAATACACATCCTAATACAGATTCTTTT
CAATAATACACTCCTATCCACATCTTTTCCCTTCTGTTTGAACTGAAGCTCGAGGTGAAG
CTCAATCTCCATCGCCCCTCCGGCCGCCCATTCATGCAGCAGGCCAGACGTACGTTGCCG
CTCACAAGCGTGGAGCATGGCTTGGCTGGCAGCGGCCCGCCTGCGCTTGCCGGACCTAGT
TGTGCAGCAGCTTGGCCATGACCGACGTCTCAACCGGCCACACGACAGGGTGGCTCGTCG
GGCTTGTGGCTGCGGCCCGCCTGCGCTTGCCGGACCTGGCTGTGCAACTGCTTGGCCATG
ACCGGCGCCTCAACCGGTCACACGACAGGGCGGCGCGTCAGGCTTGTGGAGGAGCTTGGA
GGAGGGGTCGAGGGAGCGAGAGGAAGGACGTCGTCGACCGGAGCGTCAGCGCCATGGATT
TGATGCTTGAAGGGGAGGGGAGGGGGAGAGAGACTGCAATCTTATGATCCACGATGTTTG
GCATCTGCAGGTTATGATCGGTTTTTGTAGAAGCTGTACAAGGGTGCATCATGCTGCTTT
TTCCCGTCCAACACTCGAGATCATGACGCAGTTAATTAAAGATTCCCCGTCAAAAAAAAA
AAAAAAAA



Homology of Contig U35_26858 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None