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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2080_PI390587928Hv_44K_v2CATGTATTTTCAGAACGAATGCACAAGCTTATAGGAATTAAACGACGCATAATACTTTGC603GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 5.5654.5361.6670.4070.2520.244
Raw 195.264235.06779.41224.7476.5426.224



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_5493.13073e-21192 - 2519758 / 60minus None
MLOCMLOC_5492.311273e-21397 - 4569758 / 60plus None
MLOCMLOC_5492.124453e-211844 - 19039758 / 60plus None
MLOCMLOC_5492.220523e-211818 - 18779758 / 60plus None
JLOC1JLOC1_3535.120012e-211742 - 18019758 / 60plus
Harvest21ABC1574811626e-22500 - 5599758 / 60minus
Harvest35U35_184146813e-25604 - 66310060 / 60plus



Contig Sequence (681 bp)

>U35_18414 681 Hv_44K_v2
CCACAGTGAAGNATCCTTCATATCTTGATTCTAGAATTGATGAATTCTTCAAGACATTTG
AAAGCAAAATCCATGAACTGTCAGACAAGGATTTCAAGAGAAATGTCAAATCGCTTATTG
ATTCGAAACTGGAGAAATTTAAAAACTTGTGGGAGGAATCTGACTTCTACTGGGGAGAGA
TTCAAGCTGGAACTCTCAAGTTTGATAGGGTTGAGTCCGAGGTTGCTCTGCTAAGAGAGC
TCAAGAAAGAAGAATTCATCGAATTCTTTGATGAGTACATAAAGGTGGACGCCCCTCAAA
GGAGGACAGTGAGCGTGCAGGTCTTCAGCGGCAACCATTCGGCAGAGTTCAAGAAGGCGA
TCGCCGAGGATGACCTGCCCAAAACTTGCCGGATTACCGACATATTCGGCTTCAAGCGAT
CACGGCCTCTGCACCGCTCGCTGAAGGGAGGTCCAGGCCGGATCACAATGGACTGACATA
CTGCATGGTCTGCAGTGTAGTACATAGTCTGTCACCACACGCATGAACCCAATTTTGATT
GATTTTTCTCGATGGTCGCACACGATTGCACAATGCCATTAATCCATCATGTATGGAGTA
AACCATGTATTTTCAGAACGAATGCACAAGCTTATAGGAATTAAACGACGCATAATACTT
TGCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_18414 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g57073.19741e-86protein|insulin-degrading enzyme, putative, expressed
Brachypodium v1_2Bradi2g51710.39681e-88
Arabidopsis v10None