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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_20749_PI390587928Hv_44K_v2GCCGTATGAGCACTAAACTTGACATGTCTTTGTTCATCCAGCTTACATAGCATATTTTCT549GeneList: lightcyan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.5551.3751.6971.6100.8540.719
Raw 6.27227.18727.85442.0847.6276.206



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_353178253e-25550 - 60910060 / 60plus



Contig Sequence (825 bp)

>U35_35317 825 Hv_44K_v2
CTCCTATAGGGCGAATTGGGCCCTCTTCCAACATGCTCGAGCGGCCGCTGCAATGCTCAT
CTTCCATGTGAGCTAGGAAGTGGTAGTGGTTCTCTTGAGTCAGGCGAAAACAGTGCTGGT
GGGGGATTAATAGTCATTGGGTCCATGAAATGGCCACTTGCAAGATTGTTAAATTATGGC
TCTGTGAGCTCTAATGGTGAAAGCAATAGAGACACAACTGGAAATTCTAGTGGGTCCTTC
AAAGGTGGCATTGGTGGCGGTTCTGGAGGAACAATTCTTTTCTTCCTTCAAGGGCTTCTG
GTAGAGAAAAATTCATCATTGTCAGCATCTGGGGGCAAAGGAGGCATACATGGTGGAGGT
GGCGGTGGGGGTGGTAGAATACACTTCCACTGGTCAAATATTGCTACTGGAGATGAATTT
GTTCAGATTGCTTCTATCAATGGCGCAGTAGCATCAAGTGGAGGTTCCGGTAATGATGAT
GGGCATTTTGGAGAAGACGGAACAATAACAGGAAAGGAGTGCCCTGTGGGACTATATGGA
ACCTTTTGTGCCGTATGAGCACTAAACTTGACATGTCTTTGTTCATCCAGCTTACATAGC
ATATTTTCTGTTATTAGTAACACAAACAGTATATAGTATTCATCTTAATACATTTTTTTT
TACCTGTTCCTTTTCAGCGGCCGCTACGATAGGGGATGAGGCAGCATCCTCACTTCGAGT
GCTTTCGCCGTCGTCAATGGCTTCCTCGCCAGAGACTGTTGTGTCACCCCTGGCCTTTTG
CTTTTCTTCCTTAGCATGACGCCTCTCTTCTGCTCTGGCAGCCTT



Homology of Contig U35_35317 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None