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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2054_PI390587928Hv_44K_v2CTAGAGCTGTTCGTTGTTTGACTTGCTTTTATTTGATTGATGACATCACTTCTTTCCAAA1004GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_39807.216847e-231627 - 168310057 / 57plus ABC13354
JLOC1JLOC1_25977.119394e-231714 - 177010057 / 57plus
Harvest35U35_1842410783e-251005 - 106410060 / 60plus



Contig Sequence (1078 bp)

>U35_18424 1078 Hv_44K_v2
AGGGCGAATTGGGCCCTTTCCAAGATGCTCGAGCGGCCGCTGGCATAGCTAGCATGGACC
TACTTGGGCGTTCTACCGACTGGCTGGCTTCATGAGGACGAAGAAAAGTGGGAGGAGGCC
CTTGATGATATTGTTGAACAGCTTGTCAATAGTGACGGGATCTCCAAGAATGATAGGGGC
GAGACTGTGATGCGATTTGCGGGATGTGTTGCCATCGCTGCCAAAGAAGGTTGAAACAGG
GGTGGTTTCCGGTTGATACGGTTGTCCAAGAAGTGCCTTGTGTTGAATCAGTAGTTACGA
AGTTGACCGCAGGCATCGTCGCTTGGGATAGTCAGATATCATAGACTCCCTACTGGGTAG
TAGAAAATTTGACCCCTAAGTCTTAGGATACAGAAATAAATAGCCTAAAGAGTATAGTCT
AAGCGGCATAGGATATCCTAATAATTTCATTCCTTATGCTTTTAGCGGACATTTTTTCTG
GAACCCTGAGGACTCCGTCGGACTTTAGCAGTCTGCTTAAGGATATATGATCTAGCGGCC
GCTCTCAGTTGCAAGGAATTCAAAGATCTGTTCAGTGCTTGATTGAAACGCTCCAAAGTG
TCCAAAAATGGCTATCTGATCAGATGAGTCCAGAGGAGCAAGGTTTGGATATCTTGCTGT
CATATTTCCAAGGAACTGGCGATGAAGGTCCAGGACAGACATTCCGAGTCTTGGAAGAGA
AACCAGCAGCACATGCCTCTGAGCTTGGTGATCGAATTGCTCAGTCTCTGGAAGCATGGA
GTTCTACTAGTGTGGTAAGAAGAATTGTTGGAGCAGAACATGAGGTGCTAGCCGAGTTCA
AGAAAATGGTCGACTCTAAACTAAAGCTGCTCATGTCAGAATCGGCTTCTCTATCTTCGG
TGTTGCACTAGAGTTGATGAAATTTTGCACATGAATTTTGTTCTATTCTTGTTGTGGTGT
TCCATTATACATATGTTGTAACAGTATAACAGAATGGTGTTGCACTAGAGCTGTTCGTTG
TTTGACTTGCTTTTATTTGATTGATGACATCACTTCTTTCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_18424 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None