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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_20411_PI390587928Hv_44K_v2TGTGGTCGTGACAGTCCTAAAAATTCATCTATTTTGTCCTTTTTACCGGGATATTGGTAT739GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.4861.6841.2150.8830.4440.510
Raw 1633.7032973.5971824.6672083.417371.214464.107



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC157378263e-25740 - 79910060 / 60plusABC15737
Harvest35U35_214858263e-25740 - 79910060 / 60plus



Contig Sequence (826 bp)

>U35_21485 826 Hv_44K_v2
GAGAAGGACCATGTGCGCATGGACAAAGAGCAAATGAACTCTCCTTCTCAGACAAAGCAT
CATGGTAAGAATAGAAAACATGACGGAGCTATTGATGGGAGGGCAAATGCAAATCCTAAG
GTTGTAAGCAATGTTGTTCAGAGCAGTCCCATGAGCCCACAAGCATCAAATGAAAGCACT
TATGGCACACCATCCGTTAACCGATTTAGAGTAGCAGTTCGAAAAGTTCCAAGAAAAAAA
TATGAACAGCTCAATGACAAATCCAAGAAGGACACTAGTAAGAGAGGCGTTGGCACAATT
TTCAGTGGCACCATAAGTGAAGACTCTGATGAACTATTGAACACCATGGGTGAAAAGGCT
GGCATGGAAAATTCATCAGATGATTCATCAACATCTGCTGACTCAGGCATTTCATCCACG
GCAGGGGAGGGAAGCGACGTACCTGATGACGAAGGCATTGCATCCTTGTCGCAGAGGAGT
GACATCAACTCGGTCCTCCGAGGCTCCAGAAGCTACAAGAAGGCGAGGCTGAAACCAACC
GAGCTGCTGGAGGACACGGAGGTGCCTGATAGCCAGCCTCCAGACAGTCTTTGGGGCTGA
ATGAATGGACCGACCTGATGCTTAAATGAACGCGAGTTTCACGCAATCCCCAAAATTTCG
TGCATTTGTGAGCGTAGCTGCTGAACATGTCTGGCTATCATGCTAGAAGTAAACTTCATA
CCTCCAGCTGTATTGAGTTTGTGGTCGTGACAGTCCTAAAAATTCATCTATTTTGTCCTT
TTTACCGGGATATTGGTATTTTAGTTTCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_21485 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi5g13737.114922e-57
Arabidopsis v10None