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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_20004_PI390587928Hv_44K_v2AATTTTCAGTACAGGGAATGGGACTCGCCCTACGAGAGGGTACCGCTGGCTCACAAGGTG587GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_68705.420572e-241017 - 107610060 / 60plus ABC12675 ABC12676
MLOCMLOC_68705.220822e-241073 - 113210060 / 60plus ABC12675 ABC12676
MLOCMLOC_68705.119726e-241217 - 127510059 / 59plus ABC12675 ABC12676
MLOCMLOC_68705.320582e-231017 - 107410058 / 58plus ABC12675 ABC12676
JLOC1JLOC1_45479.320828e-251023 - 108210060 / 60plus
JLOC1JLOC1_45479.220968e-251037 - 109610060 / 60plus
JLOC1JLOC1_45479.121073e-241039 - 109710059 / 59plus
Harvest21ABC201327043e-25588 - 64710060 / 60plus
Harvest35U35_88167043e-25588 - 64710060 / 60plus



Contig Sequence (704 bp)

>U35_8816 704 Hv_44K_v2
GGGTCGATCGATCGCGGGAACACGAACAACACACAGATCATCGTCCTGCACGTTGATGCG
TGCAAGCGATCTGGTTGCTCGAGATAAAGATGAAGAACAGCAGCAATCTCGAGGCCTTCC
TCCAGGCCGCCACGCCCCGGCTCCCATGGCGCTCCGCCACCATGGAACGATTCCAGGGAG
CGCCCAGCAGCGTGTGGCAACACCCAGAAGGCAAGAACAAGGACGCGGTGGAGTACTTCG
CCCTGTCCGAGCTGTGGGAGCACTACGCCGAGAGCAGCGCCTACGGCCTCGCCGTGCCCG
TCCGGGACGCCGGTGACCGCGCCGTGGTCACCACCCAGCACTTCGTCCCCTACCTCTCCG
CCGTCCAGCTCTACACCGCCACGAAGCCCACCTCCCACACCCTCGGCGCCACCTCCAGGA
GCACGGGGAGCGAGACGGATTCATGGAGCGACGACAGCGTGGGCGGCGACAGGTTCGCCG
GCTCCGGATCCTCCTCCTGGGACGCGGCGTCGGACGAAGACGACGCTTCCTCCACCTACG
ACGGCACCGGCTCCACCGGCGTCTCACCCAAGCAGAACGGGTACCTGAATTTTCAGTACA
GGGAATGGGACTCGCCCTACGAGAGGGTACCGCTGGCTCACAAGGTGGAGGAGCTGGCCC
GGGACTACCCATGCCTCATGTCGCTCAGCAGCGCCGAGCTCTCG



Homology of Contig U35_8816 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g58100.13003e-61protein|expressed protein
Brachypodium v1_2None
Arabidopsis v10None